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Cluster: HRGMv2_4336_CGC20

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4336_5 HRGMv2_4336_5_104 100366 101448 + 9.B.141.1.3
TC HRGMv2_4336_5 HRGMv2_4336_5_105 101445 102221 + 9.B.141.1.2
NULL(UNKNOWN) HRGMv2_4336_5 HRGMv2_4336_5_106 102211 102516 + NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_4336_5 HRGMv2_4336_5_107 102585 102980 + Imm33 | Imm33-like
CAZyme HRGMv2_4336_5 HRGMv2_4336_5_108 103201 104184 - GT113
TC HRGMv2_4336_5 HRGMv2_4336_5_109 104366 105448 + 3.A.1.2.17
TC HRGMv2_4336_5 HRGMv2_4336_5_110 105650 107089 + 3.A.1.3.25
TC HRGMv2_4336_5 HRGMv2_4336_5_111 107086 107838 + 3.A.1.3.25
TC HRGMv2_4336_5 HRGMv2_4336_5_112 107936 109381 + 3.A.1.3.25
Gene ID: HRGMv2_4336_5_104
Type: TC
Location: 100366 - 101448 (+)
Gene ID: HRGMv2_4336_5_105
Type: TC
Location: 101445 - 102221 (+)
Gene ID: HRGMv2_4336_5_106
Type:
Location: 102211 - 102516 (+)
Gene ID: HRGMv2_4336_5_107
Type: pfam
Location: 102585 - 102980 (+)
Gene ID: HRGMv2_4336_5_108
Type: CAZyme
Location: 103201 - 104184 (-)
Gene ID: HRGMv2_4336_5_109
Type: TC
Location: 104366 - 105448 (+)
Gene ID: HRGMv2_4336_5_110
Type: TC
Location: 105650 - 107089 (+)
Gene ID: HRGMv2_4336_5_111
Type: TC
Location: 107086 - 107838 (+)
Gene ID: HRGMv2_4336_5_112
Type: TC
Location: 107936 - 109381 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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