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Cluster: HRGMv2_4336_CGC16

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4336_4 HRGMv2_4336_4_79 84397 85878 - GH1
sulfatase HRGMv2_4336_4 HRGMv2_4336_4_80 85995 86867 - S1_7
peptidase HRGMv2_4336_4 HRGMv2_4336_4_81 86872 87921 - S09.UPW
TC HRGMv2_4336_4 HRGMv2_4336_4_82 87918 89126 - 2.A.1.68.1
TF HRGMv2_4336_4 HRGMv2_4336_4_83 89225 90097 - HTH_AraC | HTH_AraC
CAZyme HRGMv2_4336_4 HRGMv2_4336_4_84 90187 91653 - GH1
TC HRGMv2_4336_4 HRGMv2_4336_4_85 91666 93552 - 4.A.1.2.6
TF HRGMv2_4336_4 HRGMv2_4336_4_86 93719 94219 - Rrf2
TC HRGMv2_4336_4 HRGMv2_4336_4_87 94273 96642 - 9.B.74.1.3
Gene ID: HRGMv2_4336_4_79
Type: CAZyme
Location: 84397 - 85878 (-)
Gene ID: HRGMv2_4336_4_80
Type: sulfatase
Location: 85995 - 86867 (-)
Gene ID: HRGMv2_4336_4_81
Type: peptidase
Location: 86872 - 87921 (-)
Gene ID: HRGMv2_4336_4_82
Type: TC
Location: 87918 - 89126 (-)
Gene ID: HRGMv2_4336_4_83
Type: TF
Location: 89225 - 90097 (-)
Gene ID: HRGMv2_4336_4_84
Type: CAZyme
Location: 90187 - 91653 (-)
Gene ID: HRGMv2_4336_4_85
Type: TC
Location: 91666 - 93552 (-)
Gene ID: HRGMv2_4336_4_86
Type: TF
Location: 93719 - 94219 (-)
Gene ID: HRGMv2_4336_4_87
Type: TC
Location: 94273 - 96642 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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