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Cluster: HRGMv2_4336_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4336_2 HRGMv2_4336_2_388 409902 411113 + 2.A.1.14.14
pfam HRGMv2_4336_2 HRGMv2_4336_2_389 411181 411669 - MscL
TC HRGMv2_4336_2 HRGMv2_4336_2_390 411863 412792 + 2.A.7.21.4
pfam HRGMv2_4336_2 HRGMv2_4336_2_391 412950 413810 + NmrA | NAD_binding_10
TF HRGMv2_4336_2 HRGMv2_4336_2_392 413835 414260 + Rrf2
TC HRGMv2_4336_2 HRGMv2_4336_2_393 414422 415183 + 2.A.79.1.4
pfam HRGMv2_4336_2 HRGMv2_4336_2_394 415195 415641 + ThrE | ThrE_2
TC HRGMv2_4336_2 HRGMv2_4336_2_395 415832 418531 + 3.A.3.2.41
TC HRGMv2_4336_2 HRGMv2_4336_2_396 418728 420182 + 2.A.1.1.41
CAZyme HRGMv2_4336_2 HRGMv2_4336_2_397 420370 421980 + GH73
TC HRGMv2_4336_2 HRGMv2_4336_2_398 422178 423500 + 4.A.3.2.8
TC HRGMv2_4336_2 HRGMv2_4336_2_399 423584 423901 + 4.A.3.2.4
TC HRGMv2_4336_2 HRGMv2_4336_2_400 423907 424221 + 4.A.3.2.4
CAZyme HRGMv2_4336_2 HRGMv2_4336_2_401 424235 425707 + GH1
TC HRGMv2_4336_2 HRGMv2_4336_2_402 425761 427164 - 3.A.1.121.5
Gene ID: HRGMv2_4336_2_388
Type: TC
Location: 409902 - 411113 (+)
Gene ID: HRGMv2_4336_2_389
Type: pfam
Location: 411181 - 411669 (-)
Gene ID: HRGMv2_4336_2_390
Type: TC
Location: 411863 - 412792 (+)
Gene ID: HRGMv2_4336_2_391
Type: pfam
Location: 412950 - 413810 (+)
Gene ID: HRGMv2_4336_2_392
Type: TF
Location: 413835 - 414260 (+)
Gene ID: HRGMv2_4336_2_393
Type: TC
Location: 414422 - 415183 (+)
Gene ID: HRGMv2_4336_2_394
Type: pfam
Location: 415195 - 415641 (+)
Gene ID: HRGMv2_4336_2_395
Type: TC
Location: 415832 - 418531 (+)
Gene ID: HRGMv2_4336_2_396
Type: TC
Location: 418728 - 420182 (+)
Gene ID: HRGMv2_4336_2_397
Type: CAZyme
Location: 420370 - 421980 (+)
Gene ID: HRGMv2_4336_2_398
Type: TC
Location: 422178 - 423500 (+)
Gene ID: HRGMv2_4336_2_399
Type: TC
Location: 423584 - 423901 (+)
Gene ID: HRGMv2_4336_2_400
Type: TC
Location: 423907 - 424221 (+)
Gene ID: HRGMv2_4336_2_401
Type: CAZyme
Location: 424235 - 425707 (+)
Gene ID: HRGMv2_4336_2_402
Type: TC
Location: 425761 - 427164 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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