Cluster: HRGMv2_4335_CGC8
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4335
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4335_6 | HRGMv2_4335_6_95 | 84837 | 87098 | - | 3.A.9.1.2 |
| NULL(UNKNOWN) | HRGMv2_4335_6 | HRGMv2_4335_6_96 | 87232 | 87420 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| STP | HRGMv2_4335_6 | HRGMv2_4335_6_97 | 87568 | 87834 | + | PTS-HPr |
| TC | HRGMv2_4335_6 | HRGMv2_4335_6_98 | 87837 | 89561 | + | 8.A.7.1.1 |
| CAZyme | HRGMv2_4335_6 | HRGMv2_4335_6_99 | 89741 | 90931 | + | GT4 |
| CAZyme | HRGMv2_4335_6 | HRGMv2_4335_6_100 | 90947 | 91990 | + | GT4 |
Gene ID: HRGMv2_4335_6_95
Type: TC
Location: 84837 - 87098 (-)
Type: TC
Location: 84837 - 87098 (-)
Gene ID: HRGMv2_4335_6_96
Type:
Location: 87232 - 87420 (+)
Type:
Location: 87232 - 87420 (+)
Gene ID: HRGMv2_4335_6_97
Type: STP
Location: 87568 - 87834 (+)
Type: STP
Location: 87568 - 87834 (+)
Gene ID: HRGMv2_4335_6_98
Type: TC
Location: 87837 - 89561 (+)
Type: TC
Location: 87837 - 89561 (+)
Gene ID: HRGMv2_4335_6_99
Type: CAZyme
Location: 89741 - 90931 (+)
Type: CAZyme
Location: 89741 - 90931 (+)
Gene ID: HRGMv2_4335_6_100
Type: CAZyme
Location: 90947 - 91990 (+)
Type: CAZyme
Location: 90947 - 91990 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Lactobacillaceae
Genus
Lentilactobacillus
Species
Lentilactobacillus kribbianus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.