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Cluster: HRGMv2_4335_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4335_6 HRGMv2_4335_6_74 63442 64797 - 2.A.8.1.1
pfam HRGMv2_4335_6 HRGMv2_4335_6_75 64852 66402 - FGGY_N | FGGY_C
TF HRGMv2_4335_6 HRGMv2_4335_6_76 66659 67504 + HTH_6
CAZyme HRGMv2_4335_6 HRGMv2_4335_6_77 67531 68301 + GH25
pfam HRGMv2_4335_6 HRGMv2_4335_6_78 68294 68647 - DUF4828
pfam HRGMv2_4335_6 HRGMv2_4335_6_79 68778 69779 + GFO_IDH_MocA
TC HRGMv2_4335_6 HRGMv2_4335_6_80 69798 71135 + 3.A.18.1.1
pfam HRGMv2_4335_6 HRGMv2_4335_6_81 71330 71935 - DUF3862
TC HRGMv2_4335_6 HRGMv2_4335_6_82 72013 72381 - 9.B.124.1.7
pfam HRGMv2_4335_6 HRGMv2_4335_6_83 72514 72927 - GtrA_DPMS_TM
CAZyme HRGMv2_4335_6 HRGMv2_4335_6_84 72931 73872 - GT2
pfam HRGMv2_4335_6 HRGMv2_4335_6_85 74101 75243 + Epimerase_2
TC HRGMv2_4335_6 HRGMv2_4335_6_86 75243 76154 + 9.B.126.2.5
pfam HRGMv2_4335_6 HRGMv2_4335_6_87 76156 76620 - Flavodoxin_1
pfam HRGMv2_4335_6 HRGMv2_4335_6_88 76711 77514 + RecX_HTH2 | RecX_HTH3 | RecX_HTH3 | RecX_HTH1
TC HRGMv2_4335_6 HRGMv2_4335_6_89 77606 78733 + 2.A.86.1.8
Gene ID: HRGMv2_4335_6_74
Type: TC
Location: 63442 - 64797 (-)
Gene ID: HRGMv2_4335_6_75
Type: pfam
Location: 64852 - 66402 (-)
Gene ID: HRGMv2_4335_6_76
Type: TF
Location: 66659 - 67504 (+)
Gene ID: HRGMv2_4335_6_77
Type: CAZyme
Location: 67531 - 68301 (+)
Gene ID: HRGMv2_4335_6_78
Type: pfam
Location: 68294 - 68647 (-)
Gene ID: HRGMv2_4335_6_79
Type: pfam
Location: 68778 - 69779 (+)
Gene ID: HRGMv2_4335_6_80
Type: TC
Location: 69798 - 71135 (+)
Gene ID: HRGMv2_4335_6_81
Type: pfam
Location: 71330 - 71935 (-)
Gene ID: HRGMv2_4335_6_82
Type: TC
Location: 72013 - 72381 (-)
Gene ID: HRGMv2_4335_6_83
Type: pfam
Location: 72514 - 72927 (-)
Gene ID: HRGMv2_4335_6_84
Type: CAZyme
Location: 72931 - 73872 (-)
Gene ID: HRGMv2_4335_6_85
Type: pfam
Location: 74101 - 75243 (+)
Gene ID: HRGMv2_4335_6_86
Type: TC
Location: 75243 - 76154 (+)
Gene ID: HRGMv2_4335_6_87
Type: pfam
Location: 76156 - 76620 (-)
Gene ID: HRGMv2_4335_6_88
Type: pfam
Location: 76711 - 77514 (+)
Gene ID: HRGMv2_4335_6_89
Type: TC
Location: 77606 - 78733 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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