Cluster: HRGMv2_4335_CGC12
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4335
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4335_14 | HRGMv2_4335_14_8 | 8596 | 9729 | + | CE9 |
| TF | HRGMv2_4335_14 | HRGMv2_4335_14_9 | 9748 | 10452 | + | GntR |
| CAZyme | HRGMv2_4335_14 | HRGMv2_4335_14_10 | 10483 | 11211 | - | GT26 |
| pfam | HRGMv2_4335_14 | HRGMv2_4335_14_11 | 11316 | 12794 | + | NAPRTase | NAPRTase_N | NAPRTase_C |
| pfam | HRGMv2_4335_14 | HRGMv2_4335_14_12 | 12797 | 13621 | + | NAD_synthase |
| TC | HRGMv2_4335_14 | HRGMv2_4335_14_13 | 13823 | 16486 | + | 3.A.3.2.28 |
Gene ID: HRGMv2_4335_14_8
Type: CAZyme
Location: 8596 - 9729 (+)
Type: CAZyme
Location: 8596 - 9729 (+)
Gene ID: HRGMv2_4335_14_9
Type: TF
Location: 9748 - 10452 (+)
Type: TF
Location: 9748 - 10452 (+)
Gene ID: HRGMv2_4335_14_10
Type: CAZyme
Location: 10483 - 11211 (-)
Type: CAZyme
Location: 10483 - 11211 (-)
Gene ID: HRGMv2_4335_14_11
Type: pfam
Location: 11316 - 12794 (+)
Type: pfam
Location: 11316 - 12794 (+)
Gene ID: HRGMv2_4335_14_12
Type: pfam
Location: 12797 - 13621 (+)
Type: pfam
Location: 12797 - 13621 (+)
Gene ID: HRGMv2_4335_14_13
Type: TC
Location: 13823 - 16486 (+)
Type: TC
Location: 13823 - 16486 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Lactobacillaceae
Genus
Lentilactobacillus
Species
Lentilactobacillus kribbianus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.