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Cluster: HRGMv2_4334_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4334_12 HRGMv2_4334_12_48 56979 59585 + 3.A.3.2.21
pfam HRGMv2_4334_12 HRGMv2_4334_12_49 59691 60629 - MucBP
TC HRGMv2_4334_12 HRGMv2_4334_12_50 61193 63436 - 3.A.9.1.2
NULL(UNKNOWN) HRGMv2_4334_12 HRGMv2_4334_12_51 63736 63939 + NULL(UNKNOWN)
[View Structural Homologs]
STP HRGMv2_4334_12 HRGMv2_4334_12_52 64104 64370 + PTS-HPr
TC HRGMv2_4334_12 HRGMv2_4334_12_53 64370 66100 + 8.A.7.1.1
CAZyme HRGMv2_4334_12 HRGMv2_4334_12_54 66314 67492 + GT4
CAZyme HRGMv2_4334_12 HRGMv2_4334_12_55 67505 68527 + GT4
Gene ID: HRGMv2_4334_12_48
Type: TC
Location: 56979 - 59585 (+)
Gene ID: HRGMv2_4334_12_49
Type: pfam
Location: 59691 - 60629 (-)
Gene ID: HRGMv2_4334_12_50
Type: TC
Location: 61193 - 63436 (-)
Gene ID: HRGMv2_4334_12_51
Type:
Location: 63736 - 63939 (+)
Gene ID: HRGMv2_4334_12_52
Type: STP
Location: 64104 - 64370 (+)
Gene ID: HRGMv2_4334_12_53
Type: TC
Location: 64370 - 66100 (+)
Gene ID: HRGMv2_4334_12_54
Type: CAZyme
Location: 66314 - 67492 (+)
Gene ID: HRGMv2_4334_12_55
Type: CAZyme
Location: 67505 - 68527 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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