Cluster: HRGMv2_4334_CGC18
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4334
- CGC Family ID: CGCFAM_01319
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4334_41 | HRGMv2_4334_41_8 | 9775 | 11703 | - | 3.A.3.5.19 |
| pfam | HRGMv2_4334_41 | HRGMv2_4334_41_9 | 11700 | 11972 | - | Cupredoxin_1 |
| pfam | HRGMv2_4334_41 | HRGMv2_4334_41_10 | 11989 | 12360 | - | Cupredoxin_1 |
| TC | HRGMv2_4334_41 | HRGMv2_4334_41_11 | 12544 | 13101 | - | 9.B.10.1.1 |
| NULL(UNKNOWN) | HRGMv2_4334_41 | HRGMv2_4334_41_12 | 13230 | 13412 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | HRGMv2_4334_41 | HRGMv2_4334_41_13 | 13599 | 13691 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_4334_41 | HRGMv2_4334_41_14 | 13844 | 14692 | - | CE4 |
Gene ID: HRGMv2_4334_41_8
Type: TC
Location: 9775 - 11703 (-)
Type: TC
Location: 9775 - 11703 (-)
Gene ID: HRGMv2_4334_41_9
Type: pfam
Location: 11700 - 11972 (-)
Type: pfam
Location: 11700 - 11972 (-)
Gene ID: HRGMv2_4334_41_10
Type: pfam
Location: 11989 - 12360 (-)
Type: pfam
Location: 11989 - 12360 (-)
Gene ID: HRGMv2_4334_41_11
Type: TC
Location: 12544 - 13101 (-)
Type: TC
Location: 12544 - 13101 (-)
Gene ID: HRGMv2_4334_41_12
Type:
Location: 13230 - 13412 (-)
Type:
Location: 13230 - 13412 (-)
Gene ID: HRGMv2_4334_41_13
Type:
Location: 13599 - 13691 (-)
Type:
Location: 13599 - 13691 (-)
Gene ID: HRGMv2_4334_41_14
Type: CAZyme
Location: 13844 - 14692 (-)
Type: CAZyme
Location: 13844 - 14692 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Lactobacillaceae
Genus
Levilactobacillus
Species
Levilactobacillus yonginensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.