Cluster: HRGMv2_4334_CGC15
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4334
- CGC Family ID: CGCFAM_03410
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4334_26 | HRGMv2_4334_26_3 | 2866 | 4245 | + | 2.A.2.3.3 |
| peptidase | HRGMv2_4334_26 | HRGMv2_4334_26_4 | 4238 | 5086 | + | S09.UPW |
| peptidase | HRGMv2_4334_26 | HRGMv2_4334_26_5 | 5430 | 6482 | + | S09.UPW |
| CAZyme | HRGMv2_4334_26 | HRGMv2_4334_26_6 | 6509 | 7867 | + | GH65 |
| CAZyme | HRGMv2_4334_26 | HRGMv2_4334_26_7 | 7934 | 8713 | + | GH65 |
Gene ID: HRGMv2_4334_26_3
Type: TC
Location: 2866 - 4245 (+)
Type: TC
Location: 2866 - 4245 (+)
Gene ID: HRGMv2_4334_26_4
Type: peptidase
Location: 4238 - 5086 (+)
Type: peptidase
Location: 4238 - 5086 (+)
Gene ID: HRGMv2_4334_26_5
Type: peptidase
Location: 5430 - 6482 (+)
Type: peptidase
Location: 5430 - 6482 (+)
Gene ID: HRGMv2_4334_26_6
Type: CAZyme
Location: 6509 - 7867 (+)
Type: CAZyme
Location: 6509 - 7867 (+)
Gene ID: HRGMv2_4334_26_7
Type: CAZyme
Location: 7934 - 8713 (+)
Type: CAZyme
Location: 7934 - 8713 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Lactobacillaceae
Genus
Levilactobacillus
Species
Levilactobacillus yonginensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.