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Cluster: HRGMv2_4334_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4334_14 HRGMv2_4334_14_32 36821 38176 - 2.A.3.8.12
TC HRGMv2_4334_14 HRGMv2_4334_14_33 38179 39534 - 2.A.3.1.16
STP HRGMv2_4334_14 HRGMv2_4334_14_34 39651 40688 - PALP
TC HRGMv2_4334_14 HRGMv2_4334_14_35 40760 41872 - 3.D.2.2.1
TC HRGMv2_4334_14 HRGMv2_4334_14_36 42545 43705 - 2.A.1.2.69
STP HRGMv2_4334_14 HRGMv2_4334_14_37 43917 44144 + HMA
pfam HRGMv2_4334_14 HRGMv2_4334_14_38 44175 44729 + Ferritin
CAZyme HRGMv2_4334_14 HRGMv2_4334_14_39 44892 47195 + GH31_1
TC HRGMv2_4334_14 HRGMv2_4334_14_40 47858 49759 + 3.A.3.6.8
Gene ID: HRGMv2_4334_14_32
Type: TC
Location: 36821 - 38176 (-)
Gene ID: HRGMv2_4334_14_33
Type: TC
Location: 38179 - 39534 (-)
Gene ID: HRGMv2_4334_14_34
Type: STP
Location: 39651 - 40688 (-)
Gene ID: HRGMv2_4334_14_35
Type: TC
Location: 40760 - 41872 (-)
Gene ID: HRGMv2_4334_14_36
Type: TC
Location: 42545 - 43705 (-)
Gene ID: HRGMv2_4334_14_37
Type: STP
Location: 43917 - 44144 (+)
Gene ID: HRGMv2_4334_14_38
Type: pfam
Location: 44175 - 44729 (+)
Gene ID: HRGMv2_4334_14_39
Type: CAZyme
Location: 44892 - 47195 (+)
Gene ID: HRGMv2_4334_14_40
Type: TC
Location: 47858 - 49759 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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