Cluster: HRGMv2_4334_CGC10
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4334
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4334_14 | HRGMv2_4334_14_17 | 21334 | 23679 | - | 3.A.3.23.2 |
| NULL(UNKNOWN) | HRGMv2_4334_14 | HRGMv2_4334_14_18 | 23843 | 24004 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_4334_14 | HRGMv2_4334_14_19 | 24070 | 24918 | + | 8.A.5.1.4 |
| pfam | HRGMv2_4334_14 | HRGMv2_4334_14_20 | 25086 | 25511 | - | HSP20 |
| CAZyme | HRGMv2_4334_14 | HRGMv2_4334_14_21 | 25776 | 26579 | - | GH46 |
| NULL(UNKNOWN) | HRGMv2_4334_14 | HRGMv2_4334_14_22 | 27120 | 27485 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_4334_14 | HRGMv2_4334_14_23 | 27694 | 29061 | + | 9.A.40.2.1 |
Gene ID: HRGMv2_4334_14_17
Type: TC
Location: 21334 - 23679 (-)
Type: TC
Location: 21334 - 23679 (-)
Gene ID: HRGMv2_4334_14_18
Type:
Location: 23843 - 24004 (+)
Type:
Location: 23843 - 24004 (+)
Gene ID: HRGMv2_4334_14_19
Type: TC
Location: 24070 - 24918 (+)
Type: TC
Location: 24070 - 24918 (+)
Gene ID: HRGMv2_4334_14_20
Type: pfam
Location: 25086 - 25511 (-)
Type: pfam
Location: 25086 - 25511 (-)
Gene ID: HRGMv2_4334_14_21
Type: CAZyme
Location: 25776 - 26579 (-)
Type: CAZyme
Location: 25776 - 26579 (-)
Gene ID: HRGMv2_4334_14_22
Type:
Location: 27120 - 27485 (-)
Type:
Location: 27120 - 27485 (-)
Gene ID: HRGMv2_4334_14_23
Type: TC
Location: 27694 - 29061 (+)
Type: TC
Location: 27694 - 29061 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Lactobacillaceae
Genus
Levilactobacillus
Species
Levilactobacillus yonginensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.