Cluster: HRGMv2_4333_CGC8
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_4333
- CGC Family ID: CGCFAM_00008
- Continent: NA
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4333_20 | HRGMv2_4333_20_20 | 26533 | 27549 | + | GT2 |
| CAZyme | HRGMv2_4333_20 | HRGMv2_4333_20_21 | 27509 | 29941 | - | GT2 | GT2 |
| TC | HRGMv2_4333_20 | HRGMv2_4333_20_22 | 29910 | 30677 | - | 3.A.1.103.1 |
| TC | HRGMv2_4333_20 | HRGMv2_4333_20_23 | 30687 | 31439 | - | 3.A.1.103.6 |
| pfam | HRGMv2_4333_20 | HRGMv2_4333_20_24 | 31553 | 36844 | - | LRR_5 | LRR_5 | LRR_5 | LRR_5 | LRR_5 | LRR_5 | LRR_5 | LRR_5 | LRR_5 |
| STP | HRGMv2_4333_20 | HRGMv2_4333_20_25 | 36940 | 37878 | - | Rhodanese | Rhodanese |
| CAZyme | HRGMv2_4333_20 | HRGMv2_4333_20_26 | 37882 | 39234 | - | GT2 |
Gene ID: HRGMv2_4333_20_20
Type: CAZyme
Location: 26533 - 27549 (+)
Type: CAZyme
Location: 26533 - 27549 (+)
Gene ID: HRGMv2_4333_20_21
Type: CAZyme
Location: 27509 - 29941 (-)
Type: CAZyme
Location: 27509 - 29941 (-)
Gene ID: HRGMv2_4333_20_22
Type: TC
Location: 29910 - 30677 (-)
Type: TC
Location: 29910 - 30677 (-)
Gene ID: HRGMv2_4333_20_23
Type: TC
Location: 30687 - 31439 (-)
Type: TC
Location: 30687 - 31439 (-)
Gene ID: HRGMv2_4333_20_24
Type: pfam
Location: 31553 - 36844 (-)
Type: pfam
Location: 31553 - 36844 (-)
Gene ID: HRGMv2_4333_20_25
Type: STP
Location: 36940 - 37878 (-)
Type: STP
Location: 36940 - 37878 (-)
Gene ID: HRGMv2_4333_20_26
Type: CAZyme
Location: 37882 - 39234 (-)
Type: CAZyme
Location: 37882 - 39234 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Bariatricus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.