Cluster: HRGMv2_4333_CGC5
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4333
- CGC Family ID: CGCFAM_00932
- Continent: NA
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4333_11 | HRGMv2_4333_11_49 | 54768 | 56270 | + | 3.A.1.2.13 |
| TC | HRGMv2_4333_11 | HRGMv2_4333_11_50 | 56270 | 57262 | + | 3.A.1.2.15 |
| TC | HRGMv2_4333_11 | HRGMv2_4333_11_51 | 57243 | 58199 | + | 3.A.1.2.15 |
| pfam | HRGMv2_4333_11 | HRGMv2_4333_11_52 | 58223 | 59008 | + | AP_endonuc_2 |
| TF | HRGMv2_4333_11 | HRGMv2_4333_11_53 | 59278 | 60261 | + | LacI |
| CAZyme | HRGMv2_4333_11 | HRGMv2_4333_11_54 | 60286 | 61332 | + | GH179 |
Gene ID: HRGMv2_4333_11_49
Type: TC
Location: 54768 - 56270 (+)
Type: TC
Location: 54768 - 56270 (+)
Gene ID: HRGMv2_4333_11_50
Type: TC
Location: 56270 - 57262 (+)
Type: TC
Location: 56270 - 57262 (+)
Gene ID: HRGMv2_4333_11_51
Type: TC
Location: 57243 - 58199 (+)
Type: TC
Location: 57243 - 58199 (+)
Gene ID: HRGMv2_4333_11_52
Type: pfam
Location: 58223 - 59008 (+)
Type: pfam
Location: 58223 - 59008 (+)
Gene ID: HRGMv2_4333_11_53
Type: TF
Location: 59278 - 60261 (+)
Type: TF
Location: 59278 - 60261 (+)
Gene ID: HRGMv2_4333_11_54
Type: CAZyme
Location: 60286 - 61332 (+)
Type: CAZyme
Location: 60286 - 61332 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Bariatricus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.