Cluster: HRGMv2_4333_CGC3
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 5
- Substrate:
- Genome ID: HRGMv2_4333
- CGC Family ID: CGCFAM_01183
- Continent: NA
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4333_8 | HRGMv2_4333_8_82 | 78333 | 79106 | - | 3.A.1.11.1 |
| STP | HRGMv2_4333_8 | HRGMv2_4333_8_83 | 79094 | 80068 | - | SBP_bac_1 |
| TC | HRGMv2_4333_8 | HRGMv2_4333_8_84 | 80222 | 81664 | - | 2.A.66.2.22 |
| CAZyme | HRGMv2_4333_8 | HRGMv2_4333_8_85 | 81680 | 82627 | - | GT2 |
| CAZyme | HRGMv2_4333_8 | HRGMv2_4333_8_86 | 82635 | 83759 | - | GT4 |
| pfam | HRGMv2_4333_8 | HRGMv2_4333_8_87 | 83756 | 85189 | - | O-antigen_lig |
| CAZyme | HRGMv2_4333_8 | HRGMv2_4333_8_88 | 85179 | 86177 | - | GT2 |
| pfam | HRGMv2_4333_8 | HRGMv2_4333_8_89 | 86220 | 87326 | - | Epimerase_2 |
| CAZyme | HRGMv2_4333_8 | HRGMv2_4333_8_90 | 87316 | 88050 | - | GT26 |
| TC | HRGMv2_4333_8 | HRGMv2_4333_8_91 | 88136 | 89518 | - | 9.B.18.1.3 |
| NULL(UNKNOWN) | HRGMv2_4333_8 | HRGMv2_4333_8_92 | 89625 | 90680 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_4333_8 | HRGMv2_4333_8_93 | 90718 | 93048 | - | YfhO | YfhO |
| CAZyme | HRGMv2_4333_8 | HRGMv2_4333_8_94 | 93124 | 94539 | - | GH73 |
Gene ID: HRGMv2_4333_8_82
Type: TC
Location: 78333 - 79106 (-)
Type: TC
Location: 78333 - 79106 (-)
Gene ID: HRGMv2_4333_8_83
Type: STP
Location: 79094 - 80068 (-)
Type: STP
Location: 79094 - 80068 (-)
Gene ID: HRGMv2_4333_8_84
Type: TC
Location: 80222 - 81664 (-)
Type: TC
Location: 80222 - 81664 (-)
Gene ID: HRGMv2_4333_8_85
Type: CAZyme
Location: 81680 - 82627 (-)
Type: CAZyme
Location: 81680 - 82627 (-)
Gene ID: HRGMv2_4333_8_86
Type: CAZyme
Location: 82635 - 83759 (-)
Type: CAZyme
Location: 82635 - 83759 (-)
Gene ID: HRGMv2_4333_8_87
Type: pfam
Location: 83756 - 85189 (-)
Type: pfam
Location: 83756 - 85189 (-)
Gene ID: HRGMv2_4333_8_88
Type: CAZyme
Location: 85179 - 86177 (-)
Type: CAZyme
Location: 85179 - 86177 (-)
Gene ID: HRGMv2_4333_8_89
Type: pfam
Location: 86220 - 87326 (-)
Type: pfam
Location: 86220 - 87326 (-)
Gene ID: HRGMv2_4333_8_90
Type: CAZyme
Location: 87316 - 88050 (-)
Type: CAZyme
Location: 87316 - 88050 (-)
Gene ID: HRGMv2_4333_8_91
Type: TC
Location: 88136 - 89518 (-)
Type: TC
Location: 88136 - 89518 (-)
Gene ID: HRGMv2_4333_8_92
Type:
Location: 89625 - 90680 (-)
Type:
Location: 89625 - 90680 (-)
Gene ID: HRGMv2_4333_8_93
Type: pfam
Location: 90718 - 93048 (-)
Type: pfam
Location: 90718 - 93048 (-)
Gene ID: HRGMv2_4333_8_94
Type: CAZyme
Location: 93124 - 94539 (-)
Type: CAZyme
Location: 93124 - 94539 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Bariatricus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.