Cluster: HRGMv2_4333_CGC14
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4333
- CGC Family ID: CGCFAM_02665
- Continent: NA
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4333_37 | HRGMv2_4333_37_23 | 16898 | 18058 | - | 2.A.25.1.3 |
| NULL(UNKNOWN) | HRGMv2_4333_37 | HRGMv2_4333_37_24 | 18108 | 18488 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_4333_37 | HRGMv2_4333_37_25 | 18687 | 19082 | + | Alpha-amylase |
| CAZyme | HRGMv2_4333_37 | HRGMv2_4333_37_26 | 19051 | 20019 | + | GH13_20 |
Gene ID: HRGMv2_4333_37_23
Type: TC
Location: 16898 - 18058 (-)
Type: TC
Location: 16898 - 18058 (-)
Gene ID: HRGMv2_4333_37_24
Type:
Location: 18108 - 18488 (-)
Type:
Location: 18108 - 18488 (-)
Gene ID: HRGMv2_4333_37_25
Type: pfam
Location: 18687 - 19082 (+)
Type: pfam
Location: 18687 - 19082 (+)
Gene ID: HRGMv2_4333_37_26
Type: CAZyme
Location: 19051 - 20019 (+)
Type: CAZyme
Location: 19051 - 20019 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Bariatricus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.