Cluster: HRGMv2_4332_CGC3
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4332
- CGC Family ID: CGCFAM_06623
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4332_5 | HRGMv2_4332_5_4 | 3071 | 4849 | + | 3.A.1.135.5 |
| TC | HRGMv2_4332_5 | HRGMv2_4332_5_5 | 4849 | 6702 | + | 3.A.1.135.5 |
| TF | HRGMv2_4332_5 | HRGMv2_4332_5_6 | 6709 | 7146 | + | MarR |
| CAZyme | HRGMv2_4332_5 | HRGMv2_4332_5_7 | 7143 | 8834 | + | GH2 |
| STP | HRGMv2_4332_5 | HRGMv2_4332_5_8 | 8850 | 9770 | + | PfkB |
| pfam | HRGMv2_4332_5 | HRGMv2_4332_5_9 | 9819 | 10478 | - | Hexapep | Mac | Hexapep_2 |
| TC | HRGMv2_4332_5 | HRGMv2_4332_5_10 | 10637 | 11593 | + | 3.A.1.132.9 |
| TC | HRGMv2_4332_5 | HRGMv2_4332_5_11 | 11577 | 12443 | + | 3.A.1.132.1 |
Gene ID: HRGMv2_4332_5_4
Type: TC
Location: 3071 - 4849 (+)
Type: TC
Location: 3071 - 4849 (+)
Gene ID: HRGMv2_4332_5_5
Type: TC
Location: 4849 - 6702 (+)
Type: TC
Location: 4849 - 6702 (+)
Gene ID: HRGMv2_4332_5_6
Type: TF
Location: 6709 - 7146 (+)
Type: TF
Location: 6709 - 7146 (+)
Gene ID: HRGMv2_4332_5_7
Type: CAZyme
Location: 7143 - 8834 (+)
Type: CAZyme
Location: 7143 - 8834 (+)
Gene ID: HRGMv2_4332_5_8
Type: STP
Location: 8850 - 9770 (+)
Type: STP
Location: 8850 - 9770 (+)
Gene ID: HRGMv2_4332_5_9
Type: pfam
Location: 9819 - 10478 (-)
Type: pfam
Location: 9819 - 10478 (-)
Gene ID: HRGMv2_4332_5_10
Type: TC
Location: 10637 - 11593 (+)
Type: TC
Location: 10637 - 11593 (+)
Gene ID: HRGMv2_4332_5_11
Type: TC
Location: 11577 - 12443 (+)
Type: TC
Location: 11577 - 12443 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Sellimonas
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.