Cluster: HRGMv2_4332_CGC25
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4332
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4332_57 | HRGMv2_4332_57_3 | 1668 | 3626 | - | GH42 |
| TC | HRGMv2_4332_57 | HRGMv2_4332_57_4 | 3629 | 4990 | - | 2.A.2.1.1 |
| CAZyme | HRGMv2_4332_57 | HRGMv2_4332_57_5 | 5039 | 7123 | - | GH36 |
| pfam | HRGMv2_4332_57 | HRGMv2_4332_57_6 | 7451 | 7726 | + | Trns_repr_metal |
| TC | HRGMv2_4332_57 | HRGMv2_4332_57_7 | 7841 | 9724 | + | 3.A.3.6.16 |
| STP | HRGMv2_4332_57 | HRGMv2_4332_57_8 | 9769 | 10155 | - | HMA |
| TC | HRGMv2_4332_57 | HRGMv2_4332_57_9 | 10225 | 12231 | - | 9.A.8.1.6 |
Gene ID: HRGMv2_4332_57_3
Type: CAZyme
Location: 1668 - 3626 (-)
Type: CAZyme
Location: 1668 - 3626 (-)
Gene ID: HRGMv2_4332_57_4
Type: TC
Location: 3629 - 4990 (-)
Type: TC
Location: 3629 - 4990 (-)
Gene ID: HRGMv2_4332_57_5
Type: CAZyme
Location: 5039 - 7123 (-)
Type: CAZyme
Location: 5039 - 7123 (-)
Gene ID: HRGMv2_4332_57_6
Type: pfam
Location: 7451 - 7726 (+)
Type: pfam
Location: 7451 - 7726 (+)
Gene ID: HRGMv2_4332_57_7
Type: TC
Location: 7841 - 9724 (+)
Type: TC
Location: 7841 - 9724 (+)
Gene ID: HRGMv2_4332_57_8
Type: STP
Location: 9769 - 10155 (-)
Type: STP
Location: 9769 - 10155 (-)
Gene ID: HRGMv2_4332_57_9
Type: TC
Location: 10225 - 12231 (-)
Type: TC
Location: 10225 - 12231 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Sellimonas
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.