Cluster: HRGMv2_4332_CGC24
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4332
- CGC Family ID: CGCFAM_06622
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4332_48 | HRGMv2_4332_48_2 | 615 | 2234 | + | GH13_31 |
| NULL(UNKNOWN) | HRGMv2_4332_48 | HRGMv2_4332_48_3 | 2334 | 2621 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_4332_48 | HRGMv2_4332_48_4 | 2729 | 3247 | + | Pro_isomerase |
| TC | HRGMv2_4332_48 | HRGMv2_4332_48_5 | 3405 | 5180 | + | 3.A.1.33.1 |
| TC | HRGMv2_4332_48 | HRGMv2_4332_48_6 | 5177 | 6001 | + | 3.A.1.25.4 |
Gene ID: HRGMv2_4332_48_2
Type: CAZyme
Location: 615 - 2234 (+)
Type: CAZyme
Location: 615 - 2234 (+)
Gene ID: HRGMv2_4332_48_3
Type:
Location: 2334 - 2621 (+)
Type:
Location: 2334 - 2621 (+)
Gene ID: HRGMv2_4332_48_4
Type: pfam
Location: 2729 - 3247 (+)
Type: pfam
Location: 2729 - 3247 (+)
Gene ID: HRGMv2_4332_48_5
Type: TC
Location: 3405 - 5180 (+)
Type: TC
Location: 3405 - 5180 (+)
Gene ID: HRGMv2_4332_48_6
Type: TC
Location: 5177 - 6001 (+)
Type: TC
Location: 5177 - 6001 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Sellimonas
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.