Cluster: HRGMv2_4332_CGC2
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4332
- CGC Family ID: CGCFAM_00097
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4332_1 | HRGMv2_4332_1_88 | 97839 | 98516 | + | 3.A.1.23.6 |
| NULL(UNKNOWN) | HRGMv2_4332_1 | HRGMv2_4332_1_89 | 98530 | 98970 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_4332_1 | HRGMv2_4332_1_90 | 99463 | 100791 | - | GH32 |
| TC | HRGMv2_4332_1 | HRGMv2_4332_1_91 | 100839 | 101948 | - | 3.A.1.1.27 |
| TC | HRGMv2_4332_1 | HRGMv2_4332_1_92 | 101953 | 102804 | - | 3.A.1.1.20 |
| TC | HRGMv2_4332_1 | HRGMv2_4332_1_93 | 102776 | 103675 | - | 3.A.1.1.20 |
| TC | HRGMv2_4332_1 | HRGMv2_4332_1_94 | 103679 | 105001 | - | 3.A.1.1.20 |
Gene ID: HRGMv2_4332_1_88
Type: TC
Location: 97839 - 98516 (+)
Type: TC
Location: 97839 - 98516 (+)
Gene ID: HRGMv2_4332_1_89
Type:
Location: 98530 - 98970 (+)
Type:
Location: 98530 - 98970 (+)
Gene ID: HRGMv2_4332_1_90
Type: CAZyme
Location: 99463 - 100791 (-)
Type: CAZyme
Location: 99463 - 100791 (-)
Gene ID: HRGMv2_4332_1_91
Type: TC
Location: 100839 - 101948 (-)
Type: TC
Location: 100839 - 101948 (-)
Gene ID: HRGMv2_4332_1_92
Type: TC
Location: 101953 - 102804 (-)
Type: TC
Location: 101953 - 102804 (-)
Gene ID: HRGMv2_4332_1_93
Type: TC
Location: 102776 - 103675 (-)
Type: TC
Location: 102776 - 103675 (-)
Gene ID: HRGMv2_4332_1_94
Type: TC
Location: 103679 - 105001 (-)
Type: TC
Location: 103679 - 105001 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Sellimonas
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.