Cluster: HRGMv2_4332_CGC18
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_4332
- CGC Family ID: CGCFAM_02521
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4332_37 | HRGMv2_4332_37_9 | 11621 | 13105 | - | GH29 |
| CAZyme | HRGMv2_4332_37 | HRGMv2_4332_37_10 | 13122 | 15200 | - | GH42 |
| NULL(UNKNOWN) | HRGMv2_4332_37 | HRGMv2_4332_37_11 | 15259 | 17028 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_4332_37 | HRGMv2_4332_37_12 | 17069 | 17989 | - | 3.A.1.1.29 |
| TC | HRGMv2_4332_37 | HRGMv2_4332_37_13 | 18002 | 18949 | - | 3.A.1.1.10 |
| TC | HRGMv2_4332_37 | HRGMv2_4332_37_14 | 19190 | 19831 | + | 9.B.28.1.3 |
| CAZyme | HRGMv2_4332_37 | HRGMv2_4332_37_15 | 19859 | 22294 | + | GH94 |
Gene ID: HRGMv2_4332_37_9
Type: CAZyme
Location: 11621 - 13105 (-)
Type: CAZyme
Location: 11621 - 13105 (-)
Gene ID: HRGMv2_4332_37_10
Type: CAZyme
Location: 13122 - 15200 (-)
Type: CAZyme
Location: 13122 - 15200 (-)
Gene ID: HRGMv2_4332_37_11
Type:
Location: 15259 - 17028 (-)
Type:
Location: 15259 - 17028 (-)
Gene ID: HRGMv2_4332_37_12
Type: TC
Location: 17069 - 17989 (-)
Type: TC
Location: 17069 - 17989 (-)
Gene ID: HRGMv2_4332_37_13
Type: TC
Location: 18002 - 18949 (-)
Type: TC
Location: 18002 - 18949 (-)
Gene ID: HRGMv2_4332_37_14
Type: TC
Location: 19190 - 19831 (+)
Type: TC
Location: 19190 - 19831 (+)
Gene ID: HRGMv2_4332_37_15
Type: CAZyme
Location: 19859 - 22294 (+)
Type: CAZyme
Location: 19859 - 22294 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Sellimonas
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.