Cluster: HRGMv2_4332_CGC14
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate: fructan
- Genome ID: HRGMv2_4332
- CGC Family ID: CGCFAM_00035
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4332_27 | HRGMv2_4332_27_4 | 3188 | 4129 | + | 3.A.1.1.10 |
| TC | HRGMv2_4332_27 | HRGMv2_4332_27_5 | 4148 | 5047 | + | 3.A.1.1.29 |
| STP | HRGMv2_4332_27 | HRGMv2_4332_27_6 | 5062 | 6765 | + | SBP_bac_1 |
| CAZyme | HRGMv2_4332_27 | HRGMv2_4332_27_7 | 6765 | 8240 | + | GH32 |
| TC | HRGMv2_4332_27 | HRGMv2_4332_27_8 | 8371 | 10281 | - | 4.A.1.2.8 |
| CAZyme | HRGMv2_4332_27 | HRGMv2_4332_27_9 | 10471 | 12192 | + | GH63 |
Gene ID: HRGMv2_4332_27_4
Type: TC
Location: 3188 - 4129 (+)
Type: TC
Location: 3188 - 4129 (+)
Gene ID: HRGMv2_4332_27_5
Type: TC
Location: 4148 - 5047 (+)
Type: TC
Location: 4148 - 5047 (+)
Gene ID: HRGMv2_4332_27_6
Type: STP
Location: 5062 - 6765 (+)
Type: STP
Location: 5062 - 6765 (+)
Gene ID: HRGMv2_4332_27_7
Type: CAZyme
Location: 6765 - 8240 (+)
Type: CAZyme
Location: 6765 - 8240 (+)
Gene ID: HRGMv2_4332_27_8
Type: TC
Location: 8371 - 10281 (-)
Type: TC
Location: 8371 - 10281 (-)
Gene ID: HRGMv2_4332_27_9
Type: CAZyme
Location: 10471 - 12192 (+)
Type: CAZyme
Location: 10471 - 12192 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Sellimonas
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.