Cluster: HRGMv2_4332_CGC1
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 4
- Substrate:
- Genome ID: HRGMv2_4332
- CGC Family ID: CGCFAM_00660
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4332_1 | HRGMv2_4332_1_41 | 42683 | 43618 | - | GT2 |
| TC | HRGMv2_4332_1 | HRGMv2_4332_1_42 | 43646 | 44701 | - | 9.B.183.1.9 |
| NULL(UNKNOWN) | HRGMv2_4332_1 | HRGMv2_4332_1_43 | 44738 | 46000 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_4332_1 | HRGMv2_4332_1_44 | 46012 | 47145 | - | Glyphos_transf |
| CAZyme | HRGMv2_4332_1 | HRGMv2_4332_1_45 | 47159 | 48232 | - | GT2 |
| CAZyme | HRGMv2_4332_1 | HRGMv2_4332_1_46 | 48232 | 49296 | - | GT2 |
| pfam | HRGMv2_4332_1 | HRGMv2_4332_1_47 | 49309 | 50406 | - | GLF | NAD_binding_8 |
| TC | HRGMv2_4332_1 | HRGMv2_4332_1_48 | 50410 | 51804 | - | 9.B.18.1.3 |
| NULL(UNKNOWN) | HRGMv2_4332_1 | HRGMv2_4332_1_49 | 51922 | 53163 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_4332_1 | HRGMv2_4332_1_50 | 53135 | 53506 | - | DUF2304 |
| CAZyme | HRGMv2_4332_1 | HRGMv2_4332_1_51 | 53522 | 54193 | - | GT2 |
Gene ID: HRGMv2_4332_1_41
Type: CAZyme
Location: 42683 - 43618 (-)
Type: CAZyme
Location: 42683 - 43618 (-)
Gene ID: HRGMv2_4332_1_42
Type: TC
Location: 43646 - 44701 (-)
Type: TC
Location: 43646 - 44701 (-)
Gene ID: HRGMv2_4332_1_43
Type:
Location: 44738 - 46000 (-)
Type:
Location: 44738 - 46000 (-)
Gene ID: HRGMv2_4332_1_44
Type: pfam
Location: 46012 - 47145 (-)
Type: pfam
Location: 46012 - 47145 (-)
Gene ID: HRGMv2_4332_1_45
Type: CAZyme
Location: 47159 - 48232 (-)
Type: CAZyme
Location: 47159 - 48232 (-)
Gene ID: HRGMv2_4332_1_46
Type: CAZyme
Location: 48232 - 49296 (-)
Type: CAZyme
Location: 48232 - 49296 (-)
Gene ID: HRGMv2_4332_1_47
Type: pfam
Location: 49309 - 50406 (-)
Type: pfam
Location: 49309 - 50406 (-)
Gene ID: HRGMv2_4332_1_48
Type: TC
Location: 50410 - 51804 (-)
Type: TC
Location: 50410 - 51804 (-)
Gene ID: HRGMv2_4332_1_49
Type:
Location: 51922 - 53163 (-)
Type:
Location: 51922 - 53163 (-)
Gene ID: HRGMv2_4332_1_50
Type: pfam
Location: 53135 - 53506 (-)
Type: pfam
Location: 53135 - 53506 (-)
Gene ID: HRGMv2_4332_1_51
Type: CAZyme
Location: 53522 - 54193 (-)
Type: CAZyme
Location: 53522 - 54193 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Sellimonas
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.