Cluster: HRGMv2_4330_CGC6
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4330
- CGC Family ID: CGCFAM_07532
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4330_7 | HRGMv2_4330_7_14 | 15650 | 17185 | - | GH5_2 |
| TC | HRGMv2_4330_7 | HRGMv2_4330_7_15 | 17199 | 18917 | - | 3.A.1.106.2 |
| pfam | HRGMv2_4330_7 | HRGMv2_4330_7_16 | 19121 | 20248 | - | DnaJ | DnaJ_CXXCXGXG | DnaJ_C |
| TC | HRGMv2_4330_7 | HRGMv2_4330_7_17 | 20333 | 22171 | - | 1.A.33.1.4 |
| pfam | HRGMv2_4330_7 | HRGMv2_4330_7_18 | 22234 | 22824 | - | GrpE |
| TF | HRGMv2_4330_7 | HRGMv2_4330_7_19 | 22817 | 23884 | - | 0043758 |
| TC | HRGMv2_4330_7 | HRGMv2_4330_7_20 | 24197 | 25876 | + | 2.A.114.1.3 |
Gene ID: HRGMv2_4330_7_14
Type: CAZyme
Location: 15650 - 17185 (-)
Type: CAZyme
Location: 15650 - 17185 (-)
Gene ID: HRGMv2_4330_7_15
Type: TC
Location: 17199 - 18917 (-)
Type: TC
Location: 17199 - 18917 (-)
Gene ID: HRGMv2_4330_7_16
Type: pfam
Location: 19121 - 20248 (-)
Type: pfam
Location: 19121 - 20248 (-)
Gene ID: HRGMv2_4330_7_17
Type: TC
Location: 20333 - 22171 (-)
Type: TC
Location: 20333 - 22171 (-)
Gene ID: HRGMv2_4330_7_18
Type: pfam
Location: 22234 - 22824 (-)
Type: pfam
Location: 22234 - 22824 (-)
Gene ID: HRGMv2_4330_7_19
Type: TF
Location: 22817 - 23884 (-)
Type: TF
Location: 22817 - 23884 (-)
Gene ID: HRGMv2_4330_7_20
Type: TC
Location: 24197 - 25876 (+)
Type: TC
Location: 24197 - 25876 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
CAG-274
Genus
Gallispira
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.