Cluster: HRGMv2_4330_CGC23
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4330
- CGC Family ID: CGCFAM_00002
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4330_114 | HRGMv2_4330_114_1 | 2 | 2644 | + | GT2 | GT4 | GT4 |
| TC | HRGMv2_4330_114 | HRGMv2_4330_114_2 | 2658 | 3608 | + | 9.B.102.7.10 |
| CAZyme | HRGMv2_4330_114 | HRGMv2_4330_114_3 | 3605 | 4546 | + | GT2 |
Gene ID: HRGMv2_4330_114_1
Type: CAZyme
Location: 2 - 2644 (+)
Type: CAZyme
Location: 2 - 2644 (+)
Gene ID: HRGMv2_4330_114_2
Type: TC
Location: 2658 - 3608 (+)
Type: TC
Location: 2658 - 3608 (+)
Gene ID: HRGMv2_4330_114_3
Type: CAZyme
Location: 3605 - 4546 (+)
Type: CAZyme
Location: 3605 - 4546 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
CAG-274
Genus
Gallispira
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.