Cluster: HRGMv2_4330_CGC2
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4330
- CGC Family ID: CGCFAM_00169
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4330_2 | HRGMv2_4330_2_39 | 43887 | 45677 | - | 2.A.67.4.2 |
| CAZyme | HRGMv2_4330_2 | HRGMv2_4330_2_40 | 45813 | 46763 | + | GT2 |
| pfam | HRGMv2_4330_2 | HRGMv2_4330_2_41 | 46768 | 47196 | + | GtrA_DPMS_TM |
| TC | HRGMv2_4330_2 | HRGMv2_4330_2_42 | 47209 | 49950 | + | 9.B.144.1.5 |
| TC | HRGMv2_4330_2 | HRGMv2_4330_2_43 | 49974 | 51356 | + | 2.A.66.1.25 |
Gene ID: HRGMv2_4330_2_39
Type: TC
Location: 43887 - 45677 (-)
Type: TC
Location: 43887 - 45677 (-)
Gene ID: HRGMv2_4330_2_40
Type: CAZyme
Location: 45813 - 46763 (+)
Type: CAZyme
Location: 45813 - 46763 (+)
Gene ID: HRGMv2_4330_2_41
Type: pfam
Location: 46768 - 47196 (+)
Type: pfam
Location: 46768 - 47196 (+)
Gene ID: HRGMv2_4330_2_42
Type: TC
Location: 47209 - 49950 (+)
Type: TC
Location: 47209 - 49950 (+)
Gene ID: HRGMv2_4330_2_43
Type: TC
Location: 49974 - 51356 (+)
Type: TC
Location: 49974 - 51356 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
CAG-274
Genus
Gallispira
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.