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Cluster: HRGMv2_4330_CGC17

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4330_64 HRGMv2_4330_64_4 2539 5343 + GT51
pfam HRGMv2_4330_64 HRGMv2_4330_64_5 5593 5877 + ATPase_gene1
pfam HRGMv2_4330_64 HRGMv2_4330_64_6 5867 6250 + ATP-synt_I
TC HRGMv2_4330_64 HRGMv2_4330_64_7 6292 7065 + 3.A.2.1.5
TC HRGMv2_4330_64 HRGMv2_4330_64_8 7114 7374 + 3.A.2.1.5
pfam HRGMv2_4330_64 HRGMv2_4330_64_9 7421 7939 + ATP-synt_B
pfam HRGMv2_4330_64 HRGMv2_4330_64_10 7927 8472 + OSCP
TC HRGMv2_4330_64 HRGMv2_4330_64_11 8493 9998 + 3.A.2.1.2
TC HRGMv2_4330_64 HRGMv2_4330_64_12 10014 10877 + 3.A.2.1.5
TC HRGMv2_4330_64 HRGMv2_4330_64_13 10891 12291 + 3.A.2.1.5
TC HRGMv2_4330_64 HRGMv2_4330_64_14 12306 12713 + 3.A.2.1.5
Gene ID: HRGMv2_4330_64_4
Type: CAZyme
Location: 2539 - 5343 (+)
Gene ID: HRGMv2_4330_64_5
Type: pfam
Location: 5593 - 5877 (+)
Gene ID: HRGMv2_4330_64_6
Type: pfam
Location: 5867 - 6250 (+)
Gene ID: HRGMv2_4330_64_7
Type: TC
Location: 6292 - 7065 (+)
Gene ID: HRGMv2_4330_64_8
Type: TC
Location: 7114 - 7374 (+)
Gene ID: HRGMv2_4330_64_9
Type: pfam
Location: 7421 - 7939 (+)
Gene ID: HRGMv2_4330_64_10
Type: pfam
Location: 7927 - 8472 (+)
Gene ID: HRGMv2_4330_64_11
Type: TC
Location: 8493 - 9998 (+)
Gene ID: HRGMv2_4330_64_12
Type: TC
Location: 10014 - 10877 (+)
Gene ID: HRGMv2_4330_64_13
Type: TC
Location: 10891 - 12291 (+)
Gene ID: HRGMv2_4330_64_14
Type: TC
Location: 12306 - 12713 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Lachnospirales
→
Family
CAG-274
→
Genus
Gallispira
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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