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Cluster: HRGMv2_4330_CGC16

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4330_61 HRGMv2_4330_61_1 252 1811 - GH77
NULL(UNKNOWN) HRGMv2_4330_61 HRGMv2_4330_61_2 1918 2298 + NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_4330_61 HRGMv2_4330_61_3 2327 4183 - GIY-YIG | UVR | UvrC_RNaseH_dom | HHH_2 | HHH_5 | UvrC_RNaseH
TC HRGMv2_4330_61 HRGMv2_4330_61_4 4283 5791 + 2.A.66.2.14
pfam HRGMv2_4330_61 HRGMv2_4330_61_5 5818 6396 - DUF4364
TC HRGMv2_4330_61 HRGMv2_4330_61_6 6585 8942 - 9.A.8.1.6
pfam HRGMv2_4330_61 HRGMv2_4330_61_7 8939 9289 - Glutaredoxin | ArsC
TC HRGMv2_4330_61 HRGMv2_4330_61_8 9514 10515 + 3.A.1.24.2
TC HRGMv2_4330_61 HRGMv2_4330_61_9 10515 11201 + 3.A.1.24.5
TC HRGMv2_4330_61 HRGMv2_4330_61_10 11252 11986 + 3.A.1.24.5
Gene ID: HRGMv2_4330_61_1
Type: CAZyme
Location: 252 - 1811 (-)
Gene ID: HRGMv2_4330_61_2
Type:
Location: 1918 - 2298 (+)
Gene ID: HRGMv2_4330_61_3
Type: pfam
Location: 2327 - 4183 (-)
Gene ID: HRGMv2_4330_61_4
Type: TC
Location: 4283 - 5791 (+)
Gene ID: HRGMv2_4330_61_5
Type: pfam
Location: 5818 - 6396 (-)
Gene ID: HRGMv2_4330_61_6
Type: TC
Location: 6585 - 8942 (-)
Gene ID: HRGMv2_4330_61_7
Type: pfam
Location: 8939 - 9289 (-)
Gene ID: HRGMv2_4330_61_8
Type: TC
Location: 9514 - 10515 (+)
Gene ID: HRGMv2_4330_61_9
Type: TC
Location: 10515 - 11201 (+)
Gene ID: HRGMv2_4330_61_10
Type: TC
Location: 11252 - 11986 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Lachnospirales
→
Family
CAG-274
→
Genus
Gallispira
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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