Cluster: HRGMv2_4330_CGC14
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4330
- CGC Family ID: CGCFAM_10593
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4330_32 | HRGMv2_4330_32_2 | 165 | 545 | + | 3.B.1.1.2 |
| TC | HRGMv2_4330_32 | HRGMv2_4330_32_3 | 566 | 1792 | + | 3.B.1.1.5 |
| TC | HRGMv2_4330_32 | HRGMv2_4330_32_4 | 1808 | 3211 | + | 3.B.1.1.1 |
| pfam | HRGMv2_4330_32 | HRGMv2_4330_32_5 | 3361 | 4701 | + | PGI | PGI |
| NULL(UNKNOWN) | HRGMv2_4330_32 | HRGMv2_4330_32_6 | 4821 | 5057 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_4330_32 | HRGMv2_4330_32_7 | 5320 | 6831 | + | CBM91 | GH43_12 |
Gene ID: HRGMv2_4330_32_2
Type: TC
Location: 165 - 545 (+)
Type: TC
Location: 165 - 545 (+)
Gene ID: HRGMv2_4330_32_3
Type: TC
Location: 566 - 1792 (+)
Type: TC
Location: 566 - 1792 (+)
Gene ID: HRGMv2_4330_32_4
Type: TC
Location: 1808 - 3211 (+)
Type: TC
Location: 1808 - 3211 (+)
Gene ID: HRGMv2_4330_32_5
Type: pfam
Location: 3361 - 4701 (+)
Type: pfam
Location: 3361 - 4701 (+)
Gene ID: HRGMv2_4330_32_6
Type:
Location: 4821 - 5057 (-)
Type:
Location: 4821 - 5057 (-)
Gene ID: HRGMv2_4330_32_7
Type: CAZyme
Location: 5320 - 6831 (+)
Type: CAZyme
Location: 5320 - 6831 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
CAG-274
Genus
Gallispira
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.