Cluster: HRGMv2_4329_CGC8
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4329
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4329_10 | HRGMv2_4329_10_13 | 12534 | 13604 | + | 2.A.21.9.1 |
| TF | HRGMv2_4329_10 | HRGMv2_4329_10_14 | 13594 | 14301 | + | Trans_reg_C |
| STP | HRGMv2_4329_10 | HRGMv2_4329_10_15 | 14388 | 15518 | - | Fer4 |
| CAZyme | HRGMv2_4329_10 | HRGMv2_4329_10_16 | 15584 | 16453 | - | CE4 |
Gene ID: HRGMv2_4329_10_13
Type: TC
Location: 12534 - 13604 (+)
Type: TC
Location: 12534 - 13604 (+)
Gene ID: HRGMv2_4329_10_14
Type: TF
Location: 13594 - 14301 (+)
Type: TF
Location: 13594 - 14301 (+)
Gene ID: HRGMv2_4329_10_15
Type: STP
Location: 14388 - 15518 (-)
Type: STP
Location: 14388 - 15518 (-)
Gene ID: HRGMv2_4329_10_16
Type: CAZyme
Location: 15584 - 16453 (-)
Type: CAZyme
Location: 15584 - 16453 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Copromonas
Species
Copromonas faecavium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.