dbCAN Logo

Cluster: HRGMv2_4329_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4329_5 HRGMv2_4329_5_81 103528 105027 + GH77
TF HRGMv2_4329_5 HRGMv2_4329_5_82 105269 105484 + CSD
NULL(UNKNOWN) HRGMv2_4329_5 HRGMv2_4329_5_83 105699 106451 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_4329_5 HRGMv2_4329_5_84 106611 108248 + 3.A.1.121.4
peptidase HRGMv2_4329_5 HRGMv2_4329_5_85 108396 109571 - M38.UPW
STP HRGMv2_4329_5 HRGMv2_4329_5_86 109781 111181 - AAA
TC HRGMv2_4329_5 HRGMv2_4329_5_87 111408 111968 + 3.A.1.25.2
peptidase HRGMv2_4329_5 HRGMv2_4329_5_88 112155 113477 + M20.UND
TC HRGMv2_4329_5 HRGMv2_4329_5_89 113474 114658 + 3.A.1.2.12
TC HRGMv2_4329_5 HRGMv2_4329_5_90 114731 116287 + 3.A.1.2.12
TC HRGMv2_4329_5 HRGMv2_4329_5_91 116280 117326 + 3.A.1.2.12
TC HRGMv2_4329_5 HRGMv2_4329_5_92 117330 118286 + 3.A.1.2.18
pfam HRGMv2_4329_5 HRGMv2_4329_5_93 118443 119393 + A_deaminase
pfam HRGMv2_4329_5 HRGMv2_4329_5_94 119785 120540 + Exo_endo_phos
TC HRGMv2_4329_5 HRGMv2_4329_5_95 120607 122436 + 3.A.1.120.6
CAZyme HRGMv2_4329_5 HRGMv2_4329_5_96 122402 124627 + GH13_11
pfam HRGMv2_4329_5 HRGMv2_4329_5_97 124929 125408 - LuxS
TF HRGMv2_4329_5 HRGMv2_4329_5_98 125749 126249 + MarR
TC HRGMv2_4329_5 HRGMv2_4329_5_99 126279 128027 + 3.A.1.135.5
TC HRGMv2_4329_5 HRGMv2_4329_5_100 128017 129927 + 3.A.1.135.5
Gene ID: HRGMv2_4329_5_81
Type: CAZyme
Location: 103528 - 105027 (+)
Gene ID: HRGMv2_4329_5_82
Type: TF
Location: 105269 - 105484 (+)
Gene ID: HRGMv2_4329_5_83
Type:
Location: 105699 - 106451 (+)
Gene ID: HRGMv2_4329_5_84
Type: TC
Location: 106611 - 108248 (+)
Gene ID: HRGMv2_4329_5_85
Type: peptidase
Location: 108396 - 109571 (-)
Gene ID: HRGMv2_4329_5_86
Type: STP
Location: 109781 - 111181 (-)
Gene ID: HRGMv2_4329_5_87
Type: TC
Location: 111408 - 111968 (+)
Gene ID: HRGMv2_4329_5_88
Type: peptidase
Location: 112155 - 113477 (+)
Gene ID: HRGMv2_4329_5_89
Type: TC
Location: 113474 - 114658 (+)
Gene ID: HRGMv2_4329_5_90
Type: TC
Location: 114731 - 116287 (+)
Gene ID: HRGMv2_4329_5_91
Type: TC
Location: 116280 - 117326 (+)
Gene ID: HRGMv2_4329_5_92
Type: TC
Location: 117330 - 118286 (+)
Gene ID: HRGMv2_4329_5_93
Type: pfam
Location: 118443 - 119393 (+)
Gene ID: HRGMv2_4329_5_94
Type: pfam
Location: 119785 - 120540 (+)
Gene ID: HRGMv2_4329_5_95
Type: TC
Location: 120607 - 122436 (+)
Gene ID: HRGMv2_4329_5_96
Type: CAZyme
Location: 122402 - 124627 (+)
Gene ID: HRGMv2_4329_5_97
Type: pfam
Location: 124929 - 125408 (-)
Gene ID: HRGMv2_4329_5_98
Type: TF
Location: 125749 - 126249 (+)
Gene ID: HRGMv2_4329_5_99
Type: TC
Location: 126279 - 128027 (+)
Gene ID: HRGMv2_4329_5_100
Type: TC
Location: 128017 - 129927 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List