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Cluster: HRGMv2_4329_CGC21

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4329_40 HRGMv2_4329_40_3 2854 4965 - GH25
TC HRGMv2_4329_40 HRGMv2_4329_40_4 5579 6271 + 3.A.2.1.5
TC HRGMv2_4329_40 HRGMv2_4329_40_5 6501 6722 + 3.A.2.1.5
pfam HRGMv2_4329_40 HRGMv2_4329_40_6 6745 7233 + ATP-synt_B
TC HRGMv2_4329_40 HRGMv2_4329_40_7 7236 9251 + 3.A.2.1.5
TC HRGMv2_4329_40 HRGMv2_4329_40_8 9266 10195 + 3.A.2.1.5
TC HRGMv2_4329_40 HRGMv2_4329_40_9 10201 11595 + 3.A.2.1.5
Gene ID: HRGMv2_4329_40_3
Type: CAZyme
Location: 2854 - 4965 (-)
Gene ID: HRGMv2_4329_40_4
Type: TC
Location: 5579 - 6271 (+)
Gene ID: HRGMv2_4329_40_5
Type: TC
Location: 6501 - 6722 (+)
Gene ID: HRGMv2_4329_40_6
Type: pfam
Location: 6745 - 7233 (+)
Gene ID: HRGMv2_4329_40_7
Type: TC
Location: 7236 - 9251 (+)
Gene ID: HRGMv2_4329_40_8
Type: TC
Location: 9266 - 10195 (+)
Gene ID: HRGMv2_4329_40_9
Type: TC
Location: 10201 - 11595 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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