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Cluster: HRGMv2_4329_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4329_26 HRGMv2_4329_26_1 262 1692 + 3.B.1.1.5
pfam HRGMv2_4329_26 HRGMv2_4329_26_2 1710 2561 + OAD_gamma
TC HRGMv2_4329_26 HRGMv2_4329_26_3 2585 3067 + 3.B.1.1.2
TC HRGMv2_4329_26 HRGMv2_4329_26_4 3106 4254 + 3.B.1.1.3
TC HRGMv2_4329_26 HRGMv2_4329_26_5 4319 5731 + 3.B.1.1.6
CAZyme HRGMv2_4329_26 HRGMv2_4329_26_6 6145 8625 + GH73
Gene ID: HRGMv2_4329_26_1
Type: TC
Location: 262 - 1692 (+)
Gene ID: HRGMv2_4329_26_2
Type: pfam
Location: 1710 - 2561 (+)
Gene ID: HRGMv2_4329_26_3
Type: TC
Location: 2585 - 3067 (+)
Gene ID: HRGMv2_4329_26_4
Type: TC
Location: 3106 - 4254 (+)
Gene ID: HRGMv2_4329_26_5
Type: TC
Location: 4319 - 5731 (+)
Gene ID: HRGMv2_4329_26_6
Type: CAZyme
Location: 6145 - 8625 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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