Cluster: HRGMv2_4329_CGC13
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4329
- CGC Family ID: CGCFAM_00972
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4329_24 | HRGMv2_4329_24_36 | 36571 | 37389 | + | 3.A.1.104.2 |
| TC | HRGMv2_4329_24 | HRGMv2_4329_24_37 | 37399 | 38877 | + | 3.A.1.103.6 |
| NULL(UNKNOWN) | HRGMv2_4329_24 | HRGMv2_4329_24_38 | 38874 | 39737 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_4329_24 | HRGMv2_4329_24_39 | 39734 | 42895 | + | GT27 |
Gene ID: HRGMv2_4329_24_36
Type: TC
Location: 36571 - 37389 (+)
Type: TC
Location: 36571 - 37389 (+)
Gene ID: HRGMv2_4329_24_37
Type: TC
Location: 37399 - 38877 (+)
Type: TC
Location: 37399 - 38877 (+)
Gene ID: HRGMv2_4329_24_38
Type:
Location: 38874 - 39737 (+)
Type:
Location: 38874 - 39737 (+)
Gene ID: HRGMv2_4329_24_39
Type: CAZyme
Location: 39734 - 42895 (+)
Type: CAZyme
Location: 39734 - 42895 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Copromonas
Species
Copromonas faecavium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.