Cluster: HRGMv2_4329_CGC12
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4329
- CGC Family ID: CGCFAM_04272
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4329_22 | HRGMv2_4329_22_1 | 145 | 2784 | - | 8.A.7.1.5 |
| NULL(UNKNOWN) | HRGMv2_4329_22 | HRGMv2_4329_22_2 | 2765 | 2854 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_4329_22 | HRGMv2_4329_22_3 | 3020 | 3478 | - | DUF212 |
| CAZyme | HRGMv2_4329_22 | HRGMv2_4329_22_4 | 3492 | 4937 | - | GT5 |
Gene ID: HRGMv2_4329_22_1
Type: TC
Location: 145 - 2784 (-)
Type: TC
Location: 145 - 2784 (-)
Gene ID: HRGMv2_4329_22_2
Type:
Location: 2765 - 2854 (-)
Type:
Location: 2765 - 2854 (-)
Gene ID: HRGMv2_4329_22_3
Type: pfam
Location: 3020 - 3478 (-)
Type: pfam
Location: 3020 - 3478 (-)
Gene ID: HRGMv2_4329_22_4
Type: CAZyme
Location: 3492 - 4937 (-)
Type: CAZyme
Location: 3492 - 4937 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Copromonas
Species
Copromonas faecavium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.