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Cluster: HRGMv2_4329_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4329_19 HRGMv2_4329_19_11 11741 12418 - 3.A.1.122.8
pfam HRGMv2_4329_19 HRGMv2_4329_19_12 12420 13625 - FtsX | MacB_PCD
pfam HRGMv2_4329_19 HRGMv2_4329_19_13 13945 15006 + BPD_transp_1
TC HRGMv2_4329_19 HRGMv2_4329_19_14 15006 15782 + 3.A.1.17.4
pfam HRGMv2_4329_19 HRGMv2_4329_19_15 15911 17170 + NMT1 | NMT1_2
pfam HRGMv2_4329_19 HRGMv2_4329_19_16 17301 19097 - Flavodoxin_1 | Lactamase_B | Flavin_Reduct | Flavodoxin_5 | ODP | RUBY_RBDX
TC HRGMv2_4329_19 HRGMv2_4329_19_17 19306 20946 + 9.B.27.1.1
pfam HRGMv2_4329_19 HRGMv2_4329_19_18 21036 21464 + C_GCAxxG_C_C
CAZyme HRGMv2_4329_19 HRGMv2_4329_19_19 21465 22796 + GT2
pfam HRGMv2_4329_19 HRGMv2_4329_19_20 22802 23809 + APH
TC HRGMv2_4329_19 HRGMv2_4329_19_21 23878 24588 + 9.B.27.1.2
Gene ID: HRGMv2_4329_19_11
Type: TC
Location: 11741 - 12418 (-)
Gene ID: HRGMv2_4329_19_12
Type: pfam
Location: 12420 - 13625 (-)
Gene ID: HRGMv2_4329_19_13
Type: pfam
Location: 13945 - 15006 (+)
Gene ID: HRGMv2_4329_19_14
Type: TC
Location: 15006 - 15782 (+)
Gene ID: HRGMv2_4329_19_15
Type: pfam
Location: 15911 - 17170 (+)
Gene ID: HRGMv2_4329_19_16
Type: pfam
Location: 17301 - 19097 (-)
Gene ID: HRGMv2_4329_19_17
Type: TC
Location: 19306 - 20946 (+)
Gene ID: HRGMv2_4329_19_18
Type: pfam
Location: 21036 - 21464 (+)
Gene ID: HRGMv2_4329_19_19
Type: CAZyme
Location: 21465 - 22796 (+)
Gene ID: HRGMv2_4329_19_20
Type: pfam
Location: 22802 - 23809 (+)
Gene ID: HRGMv2_4329_19_21
Type: TC
Location: 23878 - 24588 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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