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Cluster: HRGMv2_4327_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4327_7 HRGMv2_4327_7_19 26470 27297 - GT2
TC HRGMv2_4327_7 HRGMv2_4327_7_20 27307 28668 - 9.B.18.1.3
pfam HRGMv2_4327_7 HRGMv2_4327_7_21 29085 30434 + LytR_cpsA_psr
CAZyme HRGMv2_4327_7 HRGMv2_4327_7_22 30482 31543 + GT28
pfam HRGMv2_4327_7 HRGMv2_4327_7_23 31567 31980 - HIT | DcpS_C
TC HRGMv2_4327_7 HRGMv2_4327_7_24 31973 32614 - 9.B.104.1.3
pfam HRGMv2_4327_7 HRGMv2_4327_7_25 32640 33764 - Acyl_transf_3
CAZyme HRGMv2_4327_7 HRGMv2_4327_7_26 33932 37387 + GT2
Gene ID: HRGMv2_4327_7_19
Type: CAZyme
Location: 26470 - 27297 (-)
Gene ID: HRGMv2_4327_7_20
Type: TC
Location: 27307 - 28668 (-)
Gene ID: HRGMv2_4327_7_21
Type: pfam
Location: 29085 - 30434 (+)
Gene ID: HRGMv2_4327_7_22
Type: CAZyme
Location: 30482 - 31543 (+)
Gene ID: HRGMv2_4327_7_23
Type: pfam
Location: 31567 - 31980 (-)
Gene ID: HRGMv2_4327_7_24
Type: TC
Location: 31973 - 32614 (-)
Gene ID: HRGMv2_4327_7_25
Type: pfam
Location: 32640 - 33764 (-)
Gene ID: HRGMv2_4327_7_26
Type: CAZyme
Location: 33932 - 37387 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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