Cluster: HRGMv2_4327_CGC30
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4327
- Continent: North America
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4327_61 | HRGMv2_4327_61_1 | 63 | 875 | + | 3.A.2.3.2 |
| TC | HRGMv2_4327_61 | HRGMv2_4327_61_2 | 877 | 2247 | + | 3.A.2.2.2 |
| TC | HRGMv2_4327_61 | HRGMv2_4327_61_3 | 2333 | 3001 | + | 3.A.2.2.2 |
| pfam | HRGMv2_4327_61 | HRGMv2_4327_61_4 | 3040 | 4029 | + | 2-Hacid_dh | 2-Hacid_dh_C |
| CAZyme | HRGMv2_4327_61 | HRGMv2_4327_61_5 | 4187 | 5386 | + | GH16_3 |
Gene ID: HRGMv2_4327_61_1
Type: TC
Location: 63 - 875 (+)
Type: TC
Location: 63 - 875 (+)
Gene ID: HRGMv2_4327_61_2
Type: TC
Location: 877 - 2247 (+)
Type: TC
Location: 877 - 2247 (+)
Gene ID: HRGMv2_4327_61_3
Type: TC
Location: 2333 - 3001 (+)
Type: TC
Location: 2333 - 3001 (+)
Gene ID: HRGMv2_4327_61_4
Type: pfam
Location: 3040 - 4029 (+)
Type: pfam
Location: 3040 - 4029 (+)
Gene ID: HRGMv2_4327_61_5
Type: CAZyme
Location: 4187 - 5386 (+)
Type: CAZyme
Location: 4187 - 5386 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Eubacterium_G
Species
Eubacterium_G sp937958975
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.