Cluster: HRGMv2_4327_CGC3
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4327
- CGC Family ID: CGCFAM_03547
- Continent: North America
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4327_2 | HRGMv2_4327_2_43 | 56794 | 57990 | + | 2.A.36.2.1 |
| pfam | HRGMv2_4327_2 | HRGMv2_4327_2_44 | 58188 | 58883 | + | DUF3800 |
| peptidase | HRGMv2_4327_2 | HRGMv2_4327_2_45 | 58936 | 59838 | - | S33.UPW |
| TC | HRGMv2_4327_2 | HRGMv2_4327_2_46 | 59877 | 61511 | - | 3.A.1.121.4 |
| CAZyme | HRGMv2_4327_2 | HRGMv2_4327_2_47 | 61690 | 63531 | + | GH13_11 |
| pfam | HRGMv2_4327_2 | HRGMv2_4327_2_48 | 63549 | 64316 | + | TraX |
| CAZyme | HRGMv2_4327_2 | HRGMv2_4327_2_49 | 64423 | 66366 | + | CBM13 | CBM56 | GH16_3 |
Gene ID: HRGMv2_4327_2_43
Type: TC
Location: 56794 - 57990 (+)
Type: TC
Location: 56794 - 57990 (+)
Gene ID: HRGMv2_4327_2_44
Type: pfam
Location: 58188 - 58883 (+)
Type: pfam
Location: 58188 - 58883 (+)
Gene ID: HRGMv2_4327_2_45
Type: peptidase
Location: 58936 - 59838 (-)
Type: peptidase
Location: 58936 - 59838 (-)
Gene ID: HRGMv2_4327_2_46
Type: TC
Location: 59877 - 61511 (-)
Type: TC
Location: 59877 - 61511 (-)
Gene ID: HRGMv2_4327_2_47
Type: CAZyme
Location: 61690 - 63531 (+)
Type: CAZyme
Location: 61690 - 63531 (+)
Gene ID: HRGMv2_4327_2_48
Type: pfam
Location: 63549 - 64316 (+)
Type: pfam
Location: 63549 - 64316 (+)
Gene ID: HRGMv2_4327_2_49
Type: CAZyme
Location: 64423 - 66366 (+)
Type: CAZyme
Location: 64423 - 66366 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Eubacterium_G
Species
Eubacterium_G sp937958975
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.