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Cluster: HRGMv2_4327_CGC29

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4327_54 HRGMv2_4327_54_4 2955 3578 - CBM32
CAZyme HRGMv2_4327_54 HRGMv2_4327_54_5 3589 5196 - GH28
pfam HRGMv2_4327_54 HRGMv2_4327_54_6 5190 5834 - Hydrolase | Hydrolase_like | HAD_2
TF HRGMv2_4327_54 HRGMv2_4327_54_7 5988 7001 + LacI
CAZyme HRGMv2_4327_54 HRGMv2_4327_54_8 7060 9243 - GH65
CAZyme HRGMv2_4327_54 HRGMv2_4327_54_9 9240 11537 - GH65
TC HRGMv2_4327_54 HRGMv2_4327_54_10 11613 12491 - 3.A.1.1.39
TC HRGMv2_4327_54 HRGMv2_4327_54_11 12503 12916 - 3.A.1.1.20
Gene ID: HRGMv2_4327_54_4
Type: CAZyme
Location: 2955 - 3578 (-)
Gene ID: HRGMv2_4327_54_5
Type: CAZyme
Location: 3589 - 5196 (-)
Gene ID: HRGMv2_4327_54_6
Type: pfam
Location: 5190 - 5834 (-)
Gene ID: HRGMv2_4327_54_7
Type: TF
Location: 5988 - 7001 (+)
Gene ID: HRGMv2_4327_54_8
Type: CAZyme
Location: 7060 - 9243 (-)
Gene ID: HRGMv2_4327_54_9
Type: CAZyme
Location: 9240 - 11537 (-)
Gene ID: HRGMv2_4327_54_10
Type: TC
Location: 11613 - 12491 (-)
Gene ID: HRGMv2_4327_54_11
Type: TC
Location: 12503 - 12916 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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