Cluster: HRGMv2_4327_CGC24
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4327
- CGC Family ID: CGCFAM_01144
- Continent: North America
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4327_39 | HRGMv2_4327_39_12 | 10125 | 10697 | + | 2.A.107.1.2 |
| TC | HRGMv2_4327_39 | HRGMv2_4327_39_13 | 10925 | 13513 | + | 3.A.9.1.2 |
| NULL(UNKNOWN) | HRGMv2_4327_39 | HRGMv2_4327_39_14 | 13628 | 14653 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TF | HRGMv2_4327_39 | HRGMv2_4327_39_15 | 14747 | 15103 | + | HTH_5 |
| TC | HRGMv2_4327_39 | HRGMv2_4327_39_16 | 15117 | 17195 | + | 3.A.3.6.10 |
| CAZyme | HRGMv2_4327_39 | HRGMv2_4327_39_17 | 17261 | 18013 | + | CE4 |
Gene ID: HRGMv2_4327_39_12
Type: TC
Location: 10125 - 10697 (+)
Type: TC
Location: 10125 - 10697 (+)
Gene ID: HRGMv2_4327_39_13
Type: TC
Location: 10925 - 13513 (+)
Type: TC
Location: 10925 - 13513 (+)
Gene ID: HRGMv2_4327_39_14
Type:
Location: 13628 - 14653 (+)
Type:
Location: 13628 - 14653 (+)
Gene ID: HRGMv2_4327_39_15
Type: TF
Location: 14747 - 15103 (+)
Type: TF
Location: 14747 - 15103 (+)
Gene ID: HRGMv2_4327_39_16
Type: TC
Location: 15117 - 17195 (+)
Type: TC
Location: 15117 - 17195 (+)
Gene ID: HRGMv2_4327_39_17
Type: CAZyme
Location: 17261 - 18013 (+)
Type: CAZyme
Location: 17261 - 18013 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Eubacterium_G
Species
Eubacterium_G sp937958975
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.