Cluster: HRGMv2_4327_CGC23
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4327
- CGC Family ID: CGCFAM_07579
- Continent: North America
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4327_37 | HRGMv2_4327_37_10 | 14121 | 15248 | - | CE9 |
| sulfatase | HRGMv2_4327_37 | HRGMv2_4327_37_11 | 15275 | 16006 | - | S1_9 |
| TF | HRGMv2_4327_37 | HRGMv2_4327_37_12 | 16038 | 16871 | - | HTH_AraC |
| TC | HRGMv2_4327_37 | HRGMv2_4327_37_13 | 16932 | 17804 | - | 3.A.1.1.45 |
| TC | HRGMv2_4327_37 | HRGMv2_4327_37_14 | 17814 | 18710 | - | 3.A.1.1.18 |
| STP | HRGMv2_4327_37 | HRGMv2_4327_37_15 | 18884 | 20179 | - | SBP_bac_1 |
| TC | HRGMv2_4327_37 | HRGMv2_4327_37_16 | 20437 | 22269 | - | 8.A.59.2.1 |
Gene ID: HRGMv2_4327_37_10
Type: CAZyme
Location: 14121 - 15248 (-)
Type: CAZyme
Location: 14121 - 15248 (-)
Gene ID: HRGMv2_4327_37_11
Type: sulfatase
Location: 15275 - 16006 (-)
Type: sulfatase
Location: 15275 - 16006 (-)
Gene ID: HRGMv2_4327_37_12
Type: TF
Location: 16038 - 16871 (-)
Type: TF
Location: 16038 - 16871 (-)
Gene ID: HRGMv2_4327_37_13
Type: TC
Location: 16932 - 17804 (-)
Type: TC
Location: 16932 - 17804 (-)
Gene ID: HRGMv2_4327_37_14
Type: TC
Location: 17814 - 18710 (-)
Type: TC
Location: 17814 - 18710 (-)
Gene ID: HRGMv2_4327_37_15
Type: STP
Location: 18884 - 20179 (-)
Type: STP
Location: 18884 - 20179 (-)
Gene ID: HRGMv2_4327_37_16
Type: TC
Location: 20437 - 22269 (-)
Type: TC
Location: 20437 - 22269 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Eubacterium_G
Species
Eubacterium_G sp937958975
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.