Cluster: HRGMv2_4327_CGC20
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_4327
- Continent: North America
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4327_30 | HRGMv2_4327_30_5 | 3545 | 7297 | + | CBM92 | GH18 | GH5_54 |
| TF | HRGMv2_4327_30 | HRGMv2_4327_30_6 | 7459 | 7776 | - | HTH_3 |
| CAZyme | HRGMv2_4327_30 | HRGMv2_4327_30_7 | 8083 | 9879 | + | GH16_3 |
| CAZyme | HRGMv2_4327_30 | HRGMv2_4327_30_8 | 10072 | 12717 | + | GH87 |
| TC | HRGMv2_4327_30 | HRGMv2_4327_30_9 | 12810 | 13256 | + | 1.A.22.1.4 |
Gene ID: HRGMv2_4327_30_5
Type: CAZyme
Location: 3545 - 7297 (+)
Type: CAZyme
Location: 3545 - 7297 (+)
Gene ID: HRGMv2_4327_30_6
Type: TF
Location: 7459 - 7776 (-)
Type: TF
Location: 7459 - 7776 (-)
Gene ID: HRGMv2_4327_30_7
Type: CAZyme
Location: 8083 - 9879 (+)
Type: CAZyme
Location: 8083 - 9879 (+)
Gene ID: HRGMv2_4327_30_8
Type: CAZyme
Location: 10072 - 12717 (+)
Type: CAZyme
Location: 10072 - 12717 (+)
Gene ID: HRGMv2_4327_30_9
Type: TC
Location: 12810 - 13256 (+)
Type: TC
Location: 12810 - 13256 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Eubacterium_G
Species
Eubacterium_G sp937958975
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.