Cluster: HRGMv2_4327_CGC18
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4327
- CGC Family ID: CGCFAM_00848
- Continent: North America
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4327_19 | HRGMv2_4327_19_29 | 31695 | 32108 | + | GH18 |
| pfam | HRGMv2_4327_19 | HRGMv2_4327_19_30 | 32170 | 32910 | + | Amidase_3 |
| TC | HRGMv2_4327_19 | HRGMv2_4327_19_31 | 33023 | 33931 | + | 3.A.1.121.4 |
Gene ID: HRGMv2_4327_19_29
Type: CAZyme
Location: 31695 - 32108 (+)
Type: CAZyme
Location: 31695 - 32108 (+)
Gene ID: HRGMv2_4327_19_30
Type: pfam
Location: 32170 - 32910 (+)
Type: pfam
Location: 32170 - 32910 (+)
Gene ID: HRGMv2_4327_19_31
Type: TC
Location: 33023 - 33931 (+)
Type: TC
Location: 33023 - 33931 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Eubacterium_G
Species
Eubacterium_G sp937958975
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.