Cluster: HRGMv2_4327_CGC17
🧬 Cluster Details
- Gene Count: 15
- CAZyme Count: 10
- Substrate:
- Genome ID: HRGMv2_4327
- CGC Family ID: CGCFAM_00006
- Continent: North America
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4327_19 | HRGMv2_4327_19_1 | 1 | 900 | + | GT4 |
| pfam | HRGMv2_4327_19 | HRGMv2_4327_19_2 | 910 | 1368 | + | Hexapep | Hexapep_2 |
| CAZyme | HRGMv2_4327_19 | HRGMv2_4327_19_3 | 1402 | 2544 | + | GT4 |
| NULL(UNKNOWN) | HRGMv2_4327_19 | HRGMv2_4327_19_4 | 2761 | 3849 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_4327_19 | HRGMv2_4327_19_5 | 3867 | 5042 | + | GT2 |
| CAZyme | HRGMv2_4327_19 | HRGMv2_4327_19_6 | 5054 | 6148 | + | GT4 |
| CAZyme | HRGMv2_4327_19 | HRGMv2_4327_19_7 | 6161 | 7171 | + | GT2 |
| CAZyme | HRGMv2_4327_19 | HRGMv2_4327_19_8 | 7241 | 8209 | + | GT2 |
| CAZyme | HRGMv2_4327_19 | HRGMv2_4327_19_9 | 8229 | 9431 | + | GT4 |
| CAZyme | HRGMv2_4327_19 | HRGMv2_4327_19_10 | 9469 | 10662 | + | GT4 |
| CAZyme | HRGMv2_4327_19 | HRGMv2_4327_19_11 | 10697 | 11821 | + | GT4 |
| pfam | HRGMv2_4327_19 | HRGMv2_4327_19_12 | 11832 | 12614 | + | LicD |
| CAZyme | HRGMv2_4327_19 | HRGMv2_4327_19_13 | 12688 | 13626 | + | GT2 |
| pfam | HRGMv2_4327_19 | HRGMv2_4327_19_14 | 13673 | 14863 | + | PS_pyruv_trans |
| TC | HRGMv2_4327_19 | HRGMv2_4327_19_15 | 14882 | 16417 | + | 2.A.66.1.40 |
Gene ID: HRGMv2_4327_19_1
Type: CAZyme
Location: 1 - 900 (+)
Type: CAZyme
Location: 1 - 900 (+)
Gene ID: HRGMv2_4327_19_2
Type: pfam
Location: 910 - 1368 (+)
Type: pfam
Location: 910 - 1368 (+)
Gene ID: HRGMv2_4327_19_3
Type: CAZyme
Location: 1402 - 2544 (+)
Type: CAZyme
Location: 1402 - 2544 (+)
Gene ID: HRGMv2_4327_19_4
Type:
Location: 2761 - 3849 (+)
Type:
Location: 2761 - 3849 (+)
Gene ID: HRGMv2_4327_19_5
Type: CAZyme
Location: 3867 - 5042 (+)
Type: CAZyme
Location: 3867 - 5042 (+)
Gene ID: HRGMv2_4327_19_6
Type: CAZyme
Location: 5054 - 6148 (+)
Type: CAZyme
Location: 5054 - 6148 (+)
Gene ID: HRGMv2_4327_19_7
Type: CAZyme
Location: 6161 - 7171 (+)
Type: CAZyme
Location: 6161 - 7171 (+)
Gene ID: HRGMv2_4327_19_8
Type: CAZyme
Location: 7241 - 8209 (+)
Type: CAZyme
Location: 7241 - 8209 (+)
Gene ID: HRGMv2_4327_19_9
Type: CAZyme
Location: 8229 - 9431 (+)
Type: CAZyme
Location: 8229 - 9431 (+)
Gene ID: HRGMv2_4327_19_10
Type: CAZyme
Location: 9469 - 10662 (+)
Type: CAZyme
Location: 9469 - 10662 (+)
Gene ID: HRGMv2_4327_19_11
Type: CAZyme
Location: 10697 - 11821 (+)
Type: CAZyme
Location: 10697 - 11821 (+)
Gene ID: HRGMv2_4327_19_12
Type: pfam
Location: 11832 - 12614 (+)
Type: pfam
Location: 11832 - 12614 (+)
Gene ID: HRGMv2_4327_19_13
Type: CAZyme
Location: 12688 - 13626 (+)
Type: CAZyme
Location: 12688 - 13626 (+)
Gene ID: HRGMv2_4327_19_14
Type: pfam
Location: 13673 - 14863 (+)
Type: pfam
Location: 13673 - 14863 (+)
Gene ID: HRGMv2_4327_19_15
Type: TC
Location: 14882 - 16417 (+)
Type: TC
Location: 14882 - 16417 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Eubacterium_G
Species
Eubacterium_G sp937958975
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.