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Cluster: HRGMv2_4327_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4327_12 HRGMv2_4327_12_36 41866 43293 - 2.A.50.2.1
pfam HRGMv2_4327_12 HRGMv2_4327_12_37 43303 44139 - Choline_bind_1 | Choline_bind_1 | Choline_bind_3
pfam HRGMv2_4327_12 HRGMv2_4327_12_38 44374 45114 - PseudoU_synth_1 | PseudoU_synth_1
TC HRGMv2_4327_12 HRGMv2_4327_12_39 45145 45951 - 3.A.1.25.4
TC HRGMv2_4327_12 HRGMv2_4327_12_40 45955 46803 - 3.A.1.25.6
TC HRGMv2_4327_12 HRGMv2_4327_12_41 46810 47655 - 3.A.1.25.4
pfam HRGMv2_4327_12 HRGMv2_4327_12_42 47794 49668 + Sulfatase
CAZyme HRGMv2_4327_12 HRGMv2_4327_12_43 49709 51181 - GT2
Gene ID: HRGMv2_4327_12_36
Type: TC
Location: 41866 - 43293 (-)
Gene ID: HRGMv2_4327_12_37
Type: pfam
Location: 43303 - 44139 (-)
Gene ID: HRGMv2_4327_12_38
Type: pfam
Location: 44374 - 45114 (-)
Gene ID: HRGMv2_4327_12_39
Type: TC
Location: 45145 - 45951 (-)
Gene ID: HRGMv2_4327_12_40
Type: TC
Location: 45955 - 46803 (-)
Gene ID: HRGMv2_4327_12_41
Type: TC
Location: 46810 - 47655 (-)
Gene ID: HRGMv2_4327_12_42
Type: pfam
Location: 47794 - 49668 (+)
Gene ID: HRGMv2_4327_12_43
Type: CAZyme
Location: 49709 - 51181 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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