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Cluster: HRGMv2_4327_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4327_11 HRGMv2_4327_11_39 33397 37299 + GH81
pfam HRGMv2_4327_11 HRGMv2_4327_11_40 37316 37903 + Hexapep | Mac | Hexapep_2 | Hexapep_2
TC HRGMv2_4327_11 HRGMv2_4327_11_41 37987 39294 - 2.A.66.1.26
pfam HRGMv2_4327_11 HRGMv2_4327_11_42 39514 41496 + Thioredox_DsbH | Thioredoxin_7
peptidase HRGMv2_4327_11 HRGMv2_4327_11_43 41617 45948 + C01.UPB
CAZyme HRGMv2_4327_11 HRGMv2_4327_11_44 46228 50673 + GH81
TF HRGMv2_4327_11 HRGMv2_4327_11_45 50920 51687 + HTH_3
pfam HRGMv2_4327_11 HRGMv2_4327_11_46 51906 52757 + DUF3737
TC HRGMv2_4327_11 HRGMv2_4327_11_47 52941 54638 + 3.A.1.106.2
pfam HRGMv2_4327_11 HRGMv2_4327_11_48 54806 55075 + PqqD
CAZyme HRGMv2_4327_11 HRGMv2_4327_11_49 55090 55353 + GT2
Gene ID: HRGMv2_4327_11_39
Type: CAZyme
Location: 33397 - 37299 (+)
Gene ID: HRGMv2_4327_11_40
Type: pfam
Location: 37316 - 37903 (+)
Gene ID: HRGMv2_4327_11_41
Type: TC
Location: 37987 - 39294 (-)
Gene ID: HRGMv2_4327_11_42
Type: pfam
Location: 39514 - 41496 (+)
Gene ID: HRGMv2_4327_11_43
Type: peptidase
Location: 41617 - 45948 (+)
Gene ID: HRGMv2_4327_11_44
Type: CAZyme
Location: 46228 - 50673 (+)
Gene ID: HRGMv2_4327_11_45
Type: TF
Location: 50920 - 51687 (+)
Gene ID: HRGMv2_4327_11_46
Type: pfam
Location: 51906 - 52757 (+)
Gene ID: HRGMv2_4327_11_47
Type: TC
Location: 52941 - 54638 (+)
Gene ID: HRGMv2_4327_11_48
Type: pfam
Location: 54806 - 55075 (+)
Gene ID: HRGMv2_4327_11_49
Type: CAZyme
Location: 55090 - 55353 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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