Cluster: HRGMv2_4327_CGC12
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4327
- CGC Family ID: CGCFAM_04622
- Continent: North America
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4327_9 | HRGMv2_4327_9_51 | 47126 | 47971 | - | 9.B.70.1.1 |
| CAZyme | HRGMv2_4327_9 | HRGMv2_4327_9_52 | 48084 | 49382 | + | CE4 |
| TC | HRGMv2_4327_9 | HRGMv2_4327_9_53 | 49453 | 50205 | - | 3.A.1.3.25 |
| TC | HRGMv2_4327_9 | HRGMv2_4327_9_54 | 50192 | 50962 | - | 3.A.1.3.20 |
| TC | HRGMv2_4327_9 | HRGMv2_4327_9_55 | 51025 | 51795 | - | 3.A.1.3.15 |
Gene ID: HRGMv2_4327_9_51
Type: TC
Location: 47126 - 47971 (-)
Type: TC
Location: 47126 - 47971 (-)
Gene ID: HRGMv2_4327_9_52
Type: CAZyme
Location: 48084 - 49382 (+)
Type: CAZyme
Location: 48084 - 49382 (+)
Gene ID: HRGMv2_4327_9_53
Type: TC
Location: 49453 - 50205 (-)
Type: TC
Location: 49453 - 50205 (-)
Gene ID: HRGMv2_4327_9_54
Type: TC
Location: 50192 - 50962 (-)
Type: TC
Location: 50192 - 50962 (-)
Gene ID: HRGMv2_4327_9_55
Type: TC
Location: 51025 - 51795 (-)
Type: TC
Location: 51025 - 51795 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Eubacterium_G
Species
Eubacterium_G sp937958975
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.