Cluster: HRGMv2_4327_CGC11
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4327
- Continent: North America
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4327_8 | HRGMv2_4327_8_1 | 407 | 1645 | + | GH25 |
| pfam | HRGMv2_4327_8 | HRGMv2_4327_8_2 | 1724 | 2872 | - | ABC2_membrane_2 | ABC2_membrane_3 | ABC2_membrane_4 |
| TC | HRGMv2_4327_8 | HRGMv2_4327_8_3 | 2862 | 3620 | - | 3.A.1.115.1 |
Gene ID: HRGMv2_4327_8_1
Type: CAZyme
Location: 407 - 1645 (+)
Type: CAZyme
Location: 407 - 1645 (+)
Gene ID: HRGMv2_4327_8_2
Type: pfam
Location: 1724 - 2872 (-)
Type: pfam
Location: 1724 - 2872 (-)
Gene ID: HRGMv2_4327_8_3
Type: TC
Location: 2862 - 3620 (-)
Type: TC
Location: 2862 - 3620 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Eubacterium_G
Species
Eubacterium_G sp937958975
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.