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Cluster: HRGMv2_4326_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4326_5 HRGMv2_4326_5_98 111339 112913 + CBM50
TC HRGMv2_4326_5 HRGMv2_4326_5_99 113316 113942 + 3.A.1.25.5
TF HRGMv2_4326_5 HRGMv2_4326_5_100 114086 114763 - GntR
pfam HRGMv2_4326_5 HRGMv2_4326_5_101 114794 115702 - GHMP_kinases_N | GHMP_kinases_C
TC HRGMv2_4326_5 HRGMv2_4326_5_102 115920 117443 + 9.A.11.1.2
pfam HRGMv2_4326_5 HRGMv2_4326_5_103 117430 119280 + Spore_permease
pfam HRGMv2_4326_5 HRGMv2_4326_5_104 119476 120066 + Spore_II_R
TC HRGMv2_4326_5 HRGMv2_4326_5_105 120104 121153 + 3.A.15.2.1
Gene ID: HRGMv2_4326_5_98
Type: CAZyme
Location: 111339 - 112913 (+)
Gene ID: HRGMv2_4326_5_99
Type: TC
Location: 113316 - 113942 (+)
Gene ID: HRGMv2_4326_5_100
Type: TF
Location: 114086 - 114763 (-)
Gene ID: HRGMv2_4326_5_101
Type: pfam
Location: 114794 - 115702 (-)
Gene ID: HRGMv2_4326_5_102
Type: TC
Location: 115920 - 117443 (+)
Gene ID: HRGMv2_4326_5_103
Type: pfam
Location: 117430 - 119280 (+)
Gene ID: HRGMv2_4326_5_104
Type: pfam
Location: 119476 - 120066 (+)
Gene ID: HRGMv2_4326_5_105
Type: TC
Location: 120104 - 121153 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Lachnospirales
→
Family
Lachnospiraceae
→
Genus
Anaerobutyricum
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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