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Cluster: HRGMv2_4326_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4326_2 HRGMv2_4326_2_186 223382 225274 - 3.A.1.135.5
TC HRGMv2_4326_2 HRGMv2_4326_2_187 225267 227000 - 3.A.1.135.5
TF HRGMv2_4326_2 HRGMv2_4326_2_188 226997 227473 - MarR
pfam HRGMv2_4326_2 HRGMv2_4326_2_189 227759 228946 + Big_2
CAZyme HRGMv2_4326_2 HRGMv2_4326_2_190 229081 232380 - GH38
pfam HRGMv2_4326_2 HRGMv2_4326_2_191 232482 233141 - CAT
TC HRGMv2_4326_2 HRGMv2_4326_2_192 233440 233802 + 1.A.43.1.11
STP HRGMv2_4326_2 HRGMv2_4326_2_193 234252 234662 + LysR_substrate
TC HRGMv2_4326_2 HRGMv2_4326_2_194 234516 235934 - 2.A.66.1.32
Gene ID: HRGMv2_4326_2_186
Type: TC
Location: 223382 - 225274 (-)
Gene ID: HRGMv2_4326_2_187
Type: TC
Location: 225267 - 227000 (-)
Gene ID: HRGMv2_4326_2_188
Type: TF
Location: 226997 - 227473 (-)
Gene ID: HRGMv2_4326_2_189
Type: pfam
Location: 227759 - 228946 (+)
Gene ID: HRGMv2_4326_2_190
Type: CAZyme
Location: 229081 - 232380 (-)
Gene ID: HRGMv2_4326_2_191
Type: pfam
Location: 232482 - 233141 (-)
Gene ID: HRGMv2_4326_2_192
Type: TC
Location: 233440 - 233802 (+)
Gene ID: HRGMv2_4326_2_193
Type: STP
Location: 234252 - 234662 (+)
Gene ID: HRGMv2_4326_2_194
Type: TC
Location: 234516 - 235934 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Lachnospirales
→
Family
Lachnospiraceae
→
Genus
Anaerobutyricum
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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